RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CCDC71Q8IV32 467 aaPredicted RBP23.23■■□□□ 1.31
NME3-208ENST00000565379 RNF113BQ8IZP6 322 aaKnown RBP23.23■■□□□ 1.31
NME3-208ENST00000565379 ZHX1-C8orf76Q96EF9 292 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 PRSS27Q9BQR3 290 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 CHID1Q9BWS9 393 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 TAPBPLQ9BX59 468 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 OR11A1Q9GZK7 315 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 COQ10BQ9H8M1 238 aa23.23■■□□□ 1.31
NME3-208ENST00000565379 OTOGQ6ZRI0 2925 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 EIF1BO60739 113 aaKnown RBP23.22■■□□□ 1.31
NME3-208ENST00000565379 SYNGR4O95473 234 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 FCGR2AP12318 317 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 COX6B1P14854 86 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 DIO1P49895 249 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 NUP107P57740 925 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 SLC35A1P78382 337 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 EGR4Q05215 589 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 GK3PQ14409 553 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 B3GNT6Q6ZMB0 384 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 ZNF295-AS1Q8N0V1 137 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 MFSD8Q8NHS3 518 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 TMEM239Q8WW34 195 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 ARL5BQ96KC2 179 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 KLHL4Q9C0H6 718 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 RNF6Q9Y252 685 aa23.22■■□□□ 1.31
NME3-208ENST00000565379 MED12Q93074 2177 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 IGKV1D-42A0A075B6H8 117 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 A0A1W2PNR3 127 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 ZC3H12DA2A288 527 aaKnown RBP23.21■■□□□ 1.31
NME3-208ENST00000565379 CLCA1A8K7I4 914 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 H0YC42 278 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 CXCL13O43927 109 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 TPD52P55327 224 aaPredicted RBP23.21■■□□□ 1.31
NME3-208ENST00000565379 CCNIQ14094 377 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 FAM69AQ5T7M9 428 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 WDR88Q6ZMY6 472 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 NKAIN4Q8IVV8 208 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 ACOT11Q8WXI4 607 aaPredicted RBP23.21■■□□□ 1.31
NME3-208ENST00000565379 WNT2BQ93097 391 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 UCK2Q9BZX2 261 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 MAN2C1Q9NTJ4 1040 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 RHCGQ9UBD6 479 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 MED31Q9Y3C7 131 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 FAM215AQ9Y5M1 114 aa23.21■■□□□ 1.31
NME3-208ENST00000565379 INTS1Q8N201 2190 aaKnown RBP23.21■■□□□ 1.31
NME3-208ENST00000565379 AKAP9Q99996 3911 aa23.2■■□□□ 1.31
NME3-208ENST00000565379 PHF3Q92576 2039 aaKnown RBP23.2■■□□□ 1.3
NME3-208ENST00000565379 ERICH4A6NGS2 130 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 FAM90A27PA6NNH2 459 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 GADD45GO95257 159 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 SPIBQ01892 262 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 PMPCAQ10713 525 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 GTF2IRD2BQ6EKJ0 949 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 RTL6Q6ICC9 239 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 GTF2IRD2Q86UP8 949 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 TRIB1Q96RU8 372 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 TM9SF2Q99805 663 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 NAA11Q9BSU3 229 aaPredicted RBP23.2■■□□□ 1.3
NME3-208ENST00000565379 ARMC1Q9NVT9 282 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 CLCF1Q9UBD9 225 aa23.2■■□□□ 1.3
NME3-208ENST00000565379 NKX2-6A6NCS4 301 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 LIPT2A6NK58 231 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 SLC22A20A6NK97 555 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 FZD7O75084 574 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 FKBP6O75344 327 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 MT-ATP6P00846 226 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 MT-ND1P03886 318 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 ENPP1P22413 925 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 RRM2P31350 389 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 TIMP3P35625 211 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 AGFG1P52594 562 aaKnown RBP23.19■■□□□ 1.3
NME3-208ENST00000565379 HMGA2P52926 109 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 OR2B6P58173 313 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 KPNB1Q14974 876 aaKnown RBP23.19■■□□□ 1.3
NME3-208ENST00000565379 RRM2BQ7LG56 351 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 CA5BP1Q8WTZ4 195 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 TMEM255BQ8WV15 326 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 KTI12Q96EK9 354 aaPredicted RBP23.19■■□□□ 1.3
NME3-208ENST00000565379 ZFP3Q96NJ6 502 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 KRCC1Q9NPI7 259 aaPredicted RBP23.19■■□□□ 1.3
NME3-208ENST00000565379 TESMINQ9Y4I5 508 aa23.19■■□□□ 1.3
NME3-208ENST00000565379 CCDC168Q8NDH2 2452 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 MBD3L4A6NDZ8 208 aaPredicted RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 MBD3L3A6NE82 208 aaPredicted RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 MBD3L5A6NJ08 208 aaPredicted RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 DIRAS1O95057 198 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 IMPDH2P12268 514 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 GTF2E2P29084 291 aaKnown RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 RPS5P46782 204 aaKnown RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 PON3Q15166 354 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 ZNF239Q16600 458 aaKnown RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 OR2T5Q6IEZ7 315 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 OR2A2Q6IF42 318 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 ZFP1Q6P2D0 407 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 P4HA3Q7Z4N8 544 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 SLC43A2Q8N370 569 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 LINC00471Q8N535 108 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 OR2T29Q8NH02 315 aa23.18■■□□□ 1.3
NME3-208ENST00000565379 MBD3L2Q8NHZ7 208 aaPredicted RBP23.18■■□□□ 1.3
NME3-208ENST00000565379 ZNF845Q96IR2 970 aaPredicted RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms