RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PRG2P13727 222 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 SLC25A16P16260 332 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 IL7RP16871 459 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 EFNA4P52798 201 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 PRPS1P60891 318 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 HPCAP84074 193 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 TGFBR3Q03167 851 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 LGALS3BPQ08380 585 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 BNIP2Q12982 314 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 OR7A5Q15622 319 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 HIKESHIQ53FT3 197 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 CEP85LQ5SZL2 805 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 OTUD3Q5T2D3 398 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 C1QTNF12Q5T7M4 302 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF836Q6ZNA1 936 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 CREB3L2Q70SY1 520 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 LINGO2Q7L985 606 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 SPATA19Q7Z5L4 167 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 VRK2Q86Y07 508 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 KIRREL3Q8IZU9 778 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 CLIP4Q8N3C7 705 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 TRIML2Q8N7C3 387 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 PNPT1Q8TCS8 783 aaKnown RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 FAM168AQ92567 244 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 PROX1Q92786 737 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 AURKBQ96GD4 344 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 RSPO3Q9BXY4 272 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 CENPHQ9H3R5 247 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 PIF1Q9H611 641 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 WDR55Q9H6Y2 383 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 FKRPQ9H9S5 495 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 ARGLU1Q9NWB6 273 aaPredicted RBP7.49□□□□□ -1.21
CAPN3-213ENST00000565173 CDC42EP3Q9UKI2 254 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 PRDM4Q9UKN5 801 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 MOKQ9UQ07 419 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 ATP23Q9Y6H3 246 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 DSPPQ9NZW4 1301 aa7.49□□□□□ -1.21
CAPN3-213ENST00000565173 HEATR1Q9H583 2144 aaKnown RBP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 IGHV1-18A0A0C4DH31 117 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 ATP6V1G2-DDX39BF2Z307 99 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 SNNO75324 88 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 TFPTP0C1Z6 253 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 ETFAP13804 333 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 CXCR1P25024 350 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 EPHA3P29320 983 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 WDR4P57081 412 aaKnown RBP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 LSM11P83369 360 aaKnown RBP eCLIP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 CHRNB3Q05901 458 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 LRRC74AQ0VAA2 488 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 GNA13Q14344 377 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 ARFGEF3Q5TH69 2177 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 CYB5R2Q6BCY4 276 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 WBP2NLQ6ICG8 309 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 AAED1Q7RTV5 226 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 EPHX4Q8IUS5 362 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 PEX5LQ8IYB4 626 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 ZNF440Q8IYI8 595 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 POMGNT2Q8NAT1 580 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 GLB1L3Q8NCI6 653 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 OR52P1PQ8NH57 321 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 SLC38A5Q8WUX1 472 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 BCL2L2Q92843 193 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 SORCS2Q96PQ0 1159 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 KCNK17Q96T54 332 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 CRNNQ9UBG3 495 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-213ENST00000565173 PMF1-BGLAPU3KQ54 211 aa7.48□□□□□ -1.21
CAPN3-213ENST00000565173 A8MVM7 634 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM229AB2RXF0 380 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 FTCDNL1E5RQL4 147 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 NR5A2O00482 541 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 RFXANKO14593 260 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 HDAC3O15379 428 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 PHF1O43189 567 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 FZD7O75084 574 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 UPK3AO75631 287 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 KRT75O95678 551 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 LGI1O95970 557 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 WNT11O96014 354 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 IL6P05231 212 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 CSF3P09919 207 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 ZCCHC18P0CG32 403 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 BMP4P12644 408 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 UQCRBP14927 111 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 CDH2P19022 906 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 USF1P22415 310 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 NR4A2P43354 598 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 SELENOPP49908 381 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 ANXA11P50995 505 aaKnown RBP7.47□□□□□ -1.21
CAPN3-213ENST00000565173 EGR4Q05215 589 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 GTDC1Q4AE62 458 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 LIN52Q52LA3 116 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 RNF220Q5VTB9 566 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 C1orf140Q5VVS0 124 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 TMEM225Q6GV28 225 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 ANKRD16Q6P6B7 361 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 MAVSQ7Z434 540 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 CROCCP2Q86T23 111 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 SERPINA11Q86U17 422 aa7.47□□□□□ -1.21
CAPN3-213ENST00000565173 GPAT4Q86UL3 456 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms