RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 BCL2L10Q9HD36 194 aa8.82□□□□□ -1
CMTM3-209ENST00000565003 CISD1Q9NZ45 108 aaKnown RBP8.82□□□□□ -1
CMTM3-209ENST00000565003 CCDC167Q9P0B6 97 aa8.82□□□□□ -1
CMTM3-209ENST00000565003 PLCE1Q9P212 2302 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 A0A1W2PP18 115 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 A8MVM7 634 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 FAM171A2A8MVW0 826 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 NPIPB7O75200 414 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 NDUFS7O75251 213 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 GPIP06744 558 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 NCF2P19878 526 aaPredicted RBP8.81□□□□□ -1
CMTM3-209ENST00000565003 PTNP21246 168 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 ZNF83P51522 516 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 CDH11P55287 796 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 GABRA6Q16445 453 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 ZSWIM7Q19AV6 140 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 C1orf140Q5VVS0 124 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 PRAMEF8Q5VWM4 474 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 PRAMEF7Q5VXH5 474 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 GPAT4Q86UL3 456 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 DTX2Q86UW9 622 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 GOLGA6L1Q8N7Z2 621 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 WDR31Q8NA23 367 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 NFKBIDQ8NI38 313 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 BBS10Q8TAM1 723 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 GTPBP3Q969Y2 492 aaKnown RBP8.81□□□□□ -1
CMTM3-209ENST00000565003 CCDC28BQ9BUN5 200 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 TRAF4Q9BUZ4 470 aaPredicted RBP8.81□□□□□ -1
CMTM3-209ENST00000565003 PTDSS2Q9BVG9 487 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 RAD21L1Q9H4I0 556 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 IKZF5Q9H5V7 419 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 CACYBPQ9HB71 228 aaKnown RBP8.81□□□□□ -1
CMTM3-209ENST00000565003 ADPRHL2Q9NX46 363 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 VAPAQ9P0L0 249 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 DCTN4Q9UJW0 460 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 ZNF232Q9UNY5 417 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 IFT52Q9Y366 437 aa8.81□□□□□ -1
CMTM3-209ENST00000565003 NIPBLQ6KC79 2804 aaeCLIP8.81□□□□□ -1
CMTM3-209ENST00000565003 TRBV5-3A0A0A0MS03 114 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 FTCDNL1E5RQL4 147 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 E7EQL1 145 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 M0R1B8 84 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 ARAFP10398 606 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 ETS2P15036 469 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 PTAFRP25105 342 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 CD40P25942 277 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 EGR4Q05215 589 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 LGALS3BPQ08380 585 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 TNK1Q13470 666 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 VEZF1Q14119 521 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 CLEC12BQ2HXU8 276 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 GLIPR1L2Q4G1C9 344 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 GCNT6Q5T4J0 391 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 OR7E24Q6IFN5 339 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 SLC22A25Q6T423 547 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 TMEM108Q6UXF1 575 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 B3GLCTQ6Y288 498 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 AAED1Q7RTV5 226 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 C17orf78Q8N4C9 275 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 C1orf162Q8NEQ5 155 aaPredicted RBP8.8□□□□□ -1
CMTM3-209ENST00000565003 STK35Q8TDR2 534 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 SLC35B4Q969S0 331 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 TRMT61AQ96FX7 289 aaKnown RBP8.8□□□□□ -1
CMTM3-209ENST00000565003 SF3B5Q9BWJ5 86 aaKnown RBP8.8□□□□□ -1
CMTM3-209ENST00000565003 TAPBPLQ9BX59 468 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 C1QTNF6Q9BXI9 259 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 ARMC7Q9H6L4 198 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 SLC17A5Q9NRA2 495 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 PARPBPQ9NWS1 579 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 UPB1Q9UBR1 384 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 GDF2Q9UK05 429 aaPredicted RBP8.8□□□□□ -1
CMTM3-209ENST00000565003 PRDM4Q9UKN5 801 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 GMEB1Q9Y692 573 aa8.8□□□□□ -1
CMTM3-209ENST00000565003 HIVEP2P31629 2446 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 IGKV1D-42A0A075B6H8 117 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 C5orf58C9J3I9 102 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 AHSA1O95433 338 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 IGHV4-39P01824 125 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 PNMTP11086 282 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 HTR2AP28223 471 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 MPGP29372 298 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 PRKAR1BP31321 381 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 ACVR1BP36896 505 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 RPS5P46782 204 aaKnown RBP8.79□□□□□ -1
CMTM3-209ENST00000565003 SELENOPP49908 381 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 ATP4BP51164 291 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 CDK6Q00534 326 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 KRTAP1-1Q07627 177 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 SQLEQ14534 574 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 AGKQ53H12 422 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 TMEM225Q6GV28 225 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 REEP3Q6NUK4 255 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 KLHL17Q6TDP4 642 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 C6orf89Q6UWU4 347 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 CREB3L2Q70SY1 520 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 EPHX4Q8IUS5 362 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 POMGNT2Q8NAT1 580 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 MFSD8Q8NHS3 518 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 DYDC1Q8WWB3 177 aa8.79□□□□□ -1
CMTM3-209ENST00000565003 KTI12Q96EK9 354 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms