RNA–Protein interactions for RNA: ENST00000564934.1

RPAP1-206, Transcript of RNA polymerase II associated protein 1, human

TSL 3

Gene RPAP1, Length 639 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP1-206	ENST00000564934	TREML1	Q86YW5	311 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	WDFY1	Q8IWB7	410 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	POMGNT2	Q8NAT1	580 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	OR4F5	Q8NH21	305 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	MRAP	Q8TCY5	172 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	BCL2L2	Q92843	193 aa	Predicted RBP	11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	POP5	Q969H6	163 aa	Known RBP	11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	C16orf58	Q96GQ5	468 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	SYT3	Q9BQG1	590 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	BTBD2	Q9BX70	525 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	NOX3	Q9HBY0	568 aa		11.11	□□□□□ -0.63
RPAP1-206	ENST00000564934	ZNF264	O43296	627 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	DNPH1	O43598	174 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	EIF4E2	O60573	245 aa	Known RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	CDC14B	O60729	498 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	KRT33A	O76009	404 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	KRT6A	P02538	564 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	KRT6B	P04259	564 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	RPS17	P08708	135 aa	Known RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	GSTA2	P09210	222 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	UBL4A	P11441	157 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	MDH1	P40925	334 aa	Known RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	KRT6C	P48668	564 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	EVX1	P49640	407 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	OR2B6	P58173	313 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	LCN2	P80188	198 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	NPRL3	Q12980	569 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	SLC17A1	Q14916	467 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	FAM189A2	Q15884	450 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	TAF9	Q16594	264 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	ZSCAN26	Q16670	478 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	KLF17	Q5JT82	389 aa	Predicted RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	REC114	Q7Z4M0	266 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	ZNF483	Q8TF39	744 aa	Predicted RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	ST8SIA1	Q92185	356 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	CDS1	Q92903	461 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	ZBTB9	Q96C00	473 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	TLCD1	Q96CP7	247 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	CHMP6	Q96FZ7	201 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	AURKB	Q96GD4	344 aa	Predicted RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	THUMPD3	Q9BV44	507 aa	Known RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	KRTAP17-1	Q9BYP8	105 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	OR11A1	Q9GZK7	315 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	HOXD1	Q9GZZ0	328 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	MOV10	Q9HCE1	1003 aa	Known RBP	11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934	DTNA	Q9Y4J8	743 aa		11.1	□□□□□ -0.63
RPAP1-206	ENST00000564934		A0A096LPK6	155 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	TLDC2	A0PJX2	215 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	FAM181B	A6NEQ2	426 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	ULK1	O75385	1050 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	CYP7B1	O75881	506 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	SHBG	P04278	402 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	NAT2	P11245	290 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	HTR6	P50406	440 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	ATP4B	P51164	291 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	MAGOH	P61326	146 aa	Known RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	H3F3A	P84243	136 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	ATP6AP1L	Q52LC2	224 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	KPRP	Q5T749	579 aa	Predicted RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	C3orf62	Q6ZUJ4	267 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	AAED1	Q7RTV5	226 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	CCDC91	Q7Z6B0	441 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	LSR	Q86X29	649 aa	Predicted RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	ADGRG3	Q86Y34	549 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	FAM169B	Q8N8A8	192 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	DEFB108B	Q8NET1	73 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	RAB8B	Q92930	207 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	TMEM45B	Q96B21	275 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	FAM107B	Q9H098	131 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	RASSF4	Q9H2L5	321 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	NELFA	Q9H3P2	528 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	CRLF2	Q9HC73	371 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	MYEF2	Q9P2K5	600 aa	Known RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	CHRNA9	Q9UGM1	479 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	HDGFL3	Q9Y3E1	203 aa		11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	SPIN1	Q9Y657	262 aa	Predicted RBP	11.09	□□□□□ -0.63
RPAP1-206	ENST00000564934	ZNF587B	E7ETH6	402 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	PDPK1	O15530	556 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	GPANK1	O95872	356 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	CBR1	P16152	277 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	SELE	P16581	610 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	NR4A1	P22736	598 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	RAD52	P43351	418 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	ATP12A	P54707	1039 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	LOXL3	P58215	753 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	RELB	Q01201	579 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	SKP2	Q13309	424 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	EXOSC6	Q5RKV6	272 aa	Known RBP	11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	MROH9	Q5TGP6	573 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	ANKRD26P1	Q6NSI1	321 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	RETREG3	Q86VR2	466 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	HOMEZ	Q8IX15	550 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	CNPY4	Q8N129	248 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	TMEM234	Q8WY98	164 aa		11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	ZNF385A	Q96PM9	386 aa	Known RBP	11.08	□□□□□ -0.64
RPAP1-206	ENST00000564934	CCDC106	Q9BWC9	280 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms