RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NHSL2Q5HYW2 709 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 C6orf52Q5T4I8 152 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 WLSQ5T9L3 541 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 C1orf140Q5VVS0 124 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 C3orf33Q6P1S2 294 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 C5orf46Q6UWT4 87 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 TMPRSS11FQ6ZWK6 438 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 YRDCQ86U90 279 aaKnown RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 SLC22A16Q86VW1 577 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 DHRSXQ8N5I4 330 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 TMEM251Q8N6I4 163 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 C10orf53Q8N6V4 93 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 ZFP62Q8NB50 900 aaPredicted RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 FAM98AQ8NCA5 519 aaKnown RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 GALNT11Q8NCW6 608 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 FAM83FQ8NEG4 500 aaPredicted RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 ATP6V1C2Q8NEY4 427 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 OR14L1PQ8NHC6 308 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 CPT1CQ8TCG5 803 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 CYGBQ8WWM9 190 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 DDIT4LQ96D03 193 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 KTI12Q96EK9 354 aaPredicted RBP10□□□□□ -0.81
SF3B3-205ENST00000564899 PIGQQ9BRB3 760 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 GABARAPL3Q9BY60 117 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 OR11A1Q9GZK7 315 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 AP4B1Q9Y6B7 739 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 DCHS2Q6V1P9 2916 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 MTORP42345 2549 aa10□□□□□ -0.81
SF3B3-205ENST00000564899 HEATR5AQ86XA9 2040 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 CNTRLQ7Z7A1 2325 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 OR2M5A3KFT3 312 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 LRRN3E7EW58 273 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 H3BML4 177 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 CDC42EP2O14613 210 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 NPIPB7O75200 414 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 OR7A10O76100 309 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 SOX14O95416 240 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 HPNP05981 417 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 TFPIP10646 304 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 PEPDP12955 493 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 OSMP13725 252 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 IL11P20809 199 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 CAPGP40121 348 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 RPS5P46782 204 aaKnown RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 ESRRGP62508 458 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 PPIAP62937 165 aaKnown RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 NPRL3Q12980 569 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF169Q14929 603 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF74Q16587 644 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 HYAL4Q2M3T9 481 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 SLC36A3Q495N2 470 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 WIPI1Q5MNZ9 446 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 C1QL3Q5VWW1 255 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF620Q6ZNG0 422 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 RASSF6Q6ZTQ3 369 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 SLC46A3Q7Z3Q1 461 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 ZNF555Q8NEP9 628 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 OR13C2Q8NGS9 318 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 SLC25A43Q8WUT9 341 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 TAAR8Q969N4 342 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 RELTQ969Z4 430 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 SFXN2Q96NB2 322 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 Q9H521 79 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 TMEM185BQ9H7F4 350 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 REV1Q9UBZ9 1251 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 ERRFI1Q9UJM3 462 aaPredicted RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 RAB26Q9ULW5 256 aa9.99□□□□□ -0.81
SF3B3-205ENST00000564899 MRPS18CQ9Y3D5 142 aaKnown RBP9.99□□□□□ -0.81
SF3B3-205ENST00000564899 TRAV27A0A087WT01 109 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 WIPF3A6NGB9 483 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 H0YAE9 185 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 H3BN98 237 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 BCKDKO14874 412 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 EFNA2O43921 213 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 IGFBP1P08833 259 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-205ENST00000564899 CELA3AP09093 270 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 PRF1P14222 555 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 FUT1P19526 365 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 CHMP24386 653 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 FKBP2P26885 142 aaKnown RBP9.98□□□□□ -0.81
SF3B3-205ENST00000564899 POU1F1P28069 291 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 IDUAP35475 653 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 POLR2IP36954 125 aaKnown RBP9.98□□□□□ -0.81
SF3B3-205ENST00000564899 MAGEA5P43359 124 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 SLC9A3P48764 834 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 CRISP1P54107 249 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 B3GALT5-AS1P59052 145 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 ADARB1P78563 741 aaKnown RBP9.98□□□□□ -0.81
SF3B3-205ENST00000564899 PMP22Q01453 160 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 TAF11Q15544 211 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 SYT14P1Q58G82 188 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 TTC23Q5W5X9 447 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 Q6ZS92 163 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 MAMDC2Q7Z304 686 aaPredicted RBP9.98□□□□□ -0.81
SF3B3-205ENST00000564899 OAFQ86UD1 273 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 KIF18BQ86Y91 864 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 FAM109AQ8N4B1 249 aa9.98□□□□□ -0.81
SF3B3-205ENST00000564899 RBMXL3Q8N7X1 1067 aaKnown RBP9.98□□□□□ -0.81
SF3B3-205ENST00000564899 Q8NA96 180 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms