RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 DOPEY1Q5JWR5 2465 aa14.26□□□□□ -0.13
RAB40C-208ENST00000564703 RELNP78509 3460 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 ARPC2O15144 300 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 NPIPB7O75200 414 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 AKR7A3O95154 331 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 THRBP10828 461 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 ITGA2P17301 1181 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 UQCRC1P31930 480 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 YAP1P46937 504 aaKnown RBP14.25□□□□□ -0.13
RAB40C-208ENST00000564703 CBX1P83916 185 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 BNIP1Q12981 228 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 PDK3Q15120 406 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 FXNQ16595 210 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 VWA1Q6PCB0 445 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 GDF7Q7Z4P5 450 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 DHFR2Q86XF0 187 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 KIF18BQ86Y91 864 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 CCDC103Q8IW40 242 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 TMEM99Q8N816 258 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 RELL2Q8NC24 303 aaPredicted RBP14.25□□□□□ -0.13
RAB40C-208ENST00000564703 POP5Q969H6 163 aaKnown RBP14.25□□□□□ -0.13
RAB40C-208ENST00000564703 PYURFQ96I23 114 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 LRGUKQ96M69 825 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 RBM24Q9BX46 236 aaKnown RBP14.25□□□□□ -0.13
RAB40C-208ENST00000564703 AMBRA1Q9C0C7 1298 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 ACTR3BQ9P1U1 418 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 KLHL13Q9P2N7 655 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 CACNA1CQ13936 2221 aa14.25□□□□□ -0.13
RAB40C-208ENST00000564703 SPTAN1Q13813 2472 aaKnown RBP14.24□□□□□ -0.13
RAB40C-208ENST00000564703 ZNF724A8MTY0 619 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 A8MXE2 369 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 PDE5AO76074 875 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 VAMP5O95183 116 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 HIST1H2ABP04908 130 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 CD8BP10966 210 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 PEX19P40855 299 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 H3F3AP84243 136 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 EGR4Q05215 589 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 LINC00114Q6XXX2 140 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 HIST3H2AQ7L7L0 130 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 RRM2BQ7LG56 351 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 GALNT5Q7Z7M9 940 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 P3H2Q8IVL5 708 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 ZNF610Q8N9Z0 462 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 OR6S1Q8NH40 331 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 HIST1H2ACQ93077 130 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 RNASE6Q93091 150 aaKnown RBP14.24□□□□□ -0.13
RAB40C-208ENST00000564703 TAAR8Q969N4 342 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 ZNF775Q96BV0 537 aaPredicted RBP14.24□□□□□ -0.13
RAB40C-208ENST00000564703 PRRC1Q96M27 445 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 PSD2Q9BQI7 771 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 ASPNQ9BXN1 380 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 SLC19A3Q9BZV2 496 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 KLHL4Q9C0H6 718 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 C12orf49Q9H741 205 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 BCO1Q9HAY6 547 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 PARPBPQ9NWS1 579 aa14.24□□□□□ -0.13
RAB40C-208ENST00000564703 DNAJC8O75937 253 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 NQO1P15559 274 aaKnown RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 CBLP22681 906 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 AGTR1P30556 359 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 RBM34P42696 430 aaKnown RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 IL1RL1Q01638 556 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 TRAM2Q15035 370 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 MTX3Q5HYI7 312 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 CYP2R1Q6VVX0 501 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 BEND4Q6ZU67 534 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 H1FNTQ75WM6 255 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 GPAT4Q86UL3 456 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 ZNF100Q8IYN0 542 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 SLC7A6OSQ96CW6 309 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 SF3B5Q9BWJ5 86 aaKnown RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 OPN3Q9H1Y3 402 aaPredicted RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 SLC24A3Q9HC58 644 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 ELOVL5Q9NYP7 299 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 JKAMPQ9P055 326 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 RASD1Q9Y272 281 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 B3GALT5Q9Y2C3 310 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 NOSIPQ9Y314 301 aaKnown RBP14.23□□□□□ -0.13
RAB40C-208ENST00000564703 MED31Q9Y3C7 131 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 CORINQ9Y5Q5 1042 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 ENPP4Q9Y6X5 453 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 V9GYQ6 96 aa14.23□□□□□ -0.13
RAB40C-208ENST00000564703 IGKV1D-42A0A075B6H8 117 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 AQP7P3A6NL99 342 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 MRPL33O75394 65 aaKnown RBP14.22□□□□□ -0.13
RAB40C-208ENST00000564703 OR6A2O95222 327 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 MT-ATP6P00846 226 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 THY1P04216 161 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 COX6B1P14854 86 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 COL8A1P27658 744 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 GRNP28799 593 aaKnown RBP14.22□□□□□ -0.13
RAB40C-208ENST00000564703 TRAP1Q12931 704 aaKnown RBP14.22□□□□□ -0.13
RAB40C-208ENST00000564703 PMS2P3Q13401 168 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 GUSBP1Q15486 140 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 FBXL19-AS1Q494R0 122 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 ABLIM2Q6H8Q1 611 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 CDK20Q8IZL9 346 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 TMEM239Q8WW34 195 aa14.22□□□□□ -0.13
RAB40C-208ENST00000564703 CCDC124Q96CT7 223 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms