RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 HLA-DQA1Q5Y7H0 255 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 GPR139Q6DWJ6 353 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 LAIR2Q6ISS4 152 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 NKAIN4Q8IVV8 208 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 TIGD4Q8IY51 512 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 ZNF614Q8N883 585 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 CLRN3Q8NCR9 226 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 DEFB124Q8NES8 71 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 OR9Q2Q8NGE9 314 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 OR4C3Q8NH37 302 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 LPAR4Q99677 370 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 DDA1Q9BW61 102 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 BCL2L14Q9BZR8 327 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 SEMA4CQ9C0C4 833 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 CCDC90BQ9GZT6 254 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 WWTR1Q9GZV5 400 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 RACGAP1Q9H0H5 632 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 DUSP21Q9H596 190 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 PPIEQ9UNP9 301 aaKnown RBP16.22■□□□□ 0.19
GDE1-203ENST00000564172 MUC6Q6W4X9 2439 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 CCDC187A0A096LP49 1063 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 RPS10-NUDT3A0A1W2PQS6 291 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 A0A1W2PRQ8 180 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 CDC14CA4D256 554 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 KLF7O75840 302 aaPredicted RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 CCNB2O95067 398 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 ANXA8P13928 327 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 GDI2P50395 445 aaKnown RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 ZNF136P52737 540 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 SNRPD2P62316 118 aaKnown RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 PLAURQ03405 335 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 EIF3IQ13347 325 aaKnown RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 DGCR6Q14129 220 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 CTU2Q2VPK5 515 aaKnown RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 HSD17B12Q53GQ0 312 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 DCST1Q5T197 706 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 LRFN4Q6PJG9 635 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 C9orf62Q8N4C0 152 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 SLC7A13Q8TCU3 470 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 C8orf44Q96CB5 159 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 MCHR1Q99705 422 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 FUZQ9BT04 418 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 KRT84Q9NSB2 600 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 MAN2C1Q9NTJ4 1040 aa16.21■□□□□ 0.19
GDE1-203ENST00000564172 C19orf25Q9UFG5 118 aaPredicted RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 ZNF223Q9UK11 482 aaPredicted RBP16.21■□□□□ 0.19
GDE1-203ENST00000564172 IL33O95760 270 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 TGFBR2P37173 567 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 NR0B1P51843 470 aaKnown RBP16.21■□□□□ 0.18
GDE1-203ENST00000564172 TAS2R41P59536 307 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 ISL1P61371 349 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 SEC23BQ15437 767 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 COL28A1Q2UY09 1125 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 KBTBD8Q8NFY9 601 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 SLC38A4Q969I6 547 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 BRD7Q9NPI1 651 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 TPRKBQ9Y3C4 175 aa16.21■□□□□ 0.18
GDE1-203ENST00000564172 PTRH2Q9Y3E5 179 aaKnown RBP16.21■□□□□ 0.18
GDE1-203ENST00000564172 CPSF4LA6NMK7 179 aaKnown RBP16.2■□□□□ 0.18
GDE1-203ENST00000564172 TO15178 435 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 UMODP07911 640 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 GKN3PP0CG01 181 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 PRG2P13727 222 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 POU2F1P14859 743 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 RAB13P51153 203 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 PSMD4P55036 377 aaKnown RBP16.2■□□□□ 0.18
GDE1-203ENST00000564172 CXCR4P61073 352 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 RNF4P78317 190 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 ASAH1Q13510 395 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 ENTPD8Q5MY95 495 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 ZNF770Q6IQ21 691 aaPredicted RBP16.2■□□□□ 0.18
GDE1-203ENST00000564172 ZNF441Q8N8Z8 693 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 NR4A3Q92570 626 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 DIO2Q92813 273 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 NPAS1Q99742 590 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 SPRY4Q9C004 299 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 RNF121Q9H920 327 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 PADI1Q9ULC6 663 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 NTNG1Q9Y2I2 539 aa16.2■□□□□ 0.18
GDE1-203ENST00000564172 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.19■□□□□ 0.18
GDE1-203ENST00000564172 ARRDC5A6NEK1 342 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 C9orf172C9J069 976 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 KRBOX1C9JBD0 128 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 PTGES3LE9PB15 166 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 CD36P16671 472 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 MAB21L1Q13394 359 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 PDSS1Q5T2R2 415 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 TIPARPQ7Z3E1 657 aaKnown RBP16.19■□□□□ 0.18
GDE1-203ENST00000564172 C17orf47Q8NEP4 570 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 CNOT9Q92600 299 aaKnown RBP16.19■□□□□ 0.18
GDE1-203ENST00000564172 NIPSNAP1Q9BPW8 284 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 SLC30A2Q9BRI3 323 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 RANBP3Q9H6Z4 567 aaPredicted RBP16.19■□□□□ 0.18
GDE1-203ENST00000564172 CCNB1IP1Q9NPC3 277 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.19■□□□□ 0.18
GDE1-203ENST00000564172 MRTO4Q9UKD2 239 aaKnown RBP16.19■□□□□ 0.18
GDE1-203ENST00000564172 CYP7B1O75881 506 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 GASTP01350 101 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 IFNA7P01567 189 aa16.19■□□□□ 0.18
GDE1-203ENST00000564172 FGFBP1Q14512 234 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms