RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 OR1Q1Q15612 314 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 BEX5Q5H9J7 111 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 SWT1Q5T5J6 900 aaKnown RBP11.87□□□□□ -0.51
CLK3-213ENST00000563842 FBXW9Q5XUX1 488 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 CALHM3Q86XJ0 350 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 UBE2J2Q8N2K1 259 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 SMYD1Q8NB12 490 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 RNF217Q8TC41 542 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 HSD17B8Q92506 261 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 CMTM5Q96DZ9 223 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 ZC3HAV1LQ96H79 300 aaKnown RBP11.87□□□□□ -0.51
CLK3-213ENST00000563842 EPYCQ99645 322 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 HOPXQ9BPY8 73 aaPredicted RBP11.87□□□□□ -0.51
CLK3-213ENST00000563842 EFCAB1Q9HAE3 211 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 ADPRHL2Q9NX46 363 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 ITGB1BP2Q9UKP3 347 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 RASD1Q9Y272 281 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 SETD2Q9BYW2 2564 aaPredicted RBP11.86□□□□□ -0.51
CLK3-213ENST00000563842 ROS1P08922 2347 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 ZNF814B7Z6K7 855 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 NDUFAB1O14561 156 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 AKR7A3O95154 331 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 OPN1SWP03999 348 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 DNASE1P24855 282 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 HTR2AP28223 471 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 DNAJA1P31689 397 aaKnown RBP11.86□□□□□ -0.51
CLK3-213ENST00000563842 SEC24CP53992 1094 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 NR1H2P55055 460 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 NRF1Q16656 503 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 DUSP7Q16829 419 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 FAM69AQ5T7M9 428 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 ZNF613Q6PF04 617 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 BHLHA15Q7RTS1 189 aaPredicted RBP11.86□□□□□ -0.51
CLK3-213ENST00000563842 POU5F2Q8N7G0 328 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 TMEM99Q8N816 258 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 PROX1Q92786 737 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 RCN3Q96D15 328 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 MCHR1Q99705 422 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 ARHGDIGQ99819 225 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 RSPO3Q9BXY4 272 aaPredicted RBP11.86□□□□□ -0.51
CLK3-213ENST00000563842 FAM107BQ9H098 131 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 C6orf203Q9P0P8 240 aaPredicted RBP11.86□□□□□ -0.51
CLK3-213ENST00000563842 PRSS50Q9UI38 385 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 ST6GALNAC2Q9UJ37 374 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 BAG5Q9UL15 447 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 FLVCR1Q9Y5Y0 555 aa11.86□□□□□ -0.51
CLK3-213ENST00000563842 TRAV36DV7A0A075B6V5 113 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 A0A087WUJ7 227 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 A0A0B4J2E0 115 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 A0A1B0GX12 115 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 FAM220BPB1ANY3 271 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 AIM2O14862 343 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 SNX3O60493 162 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 RPS5P46782 204 aaKnown RBP11.85□□□□□ -0.51
CLK3-213ENST00000563842 POU4F3Q15319 338 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 CASP12Q6UXS9 341 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 ABHD12BQ7Z5M8 362 aaPredicted RBP11.85□□□□□ -0.51
CLK3-213ENST00000563842 GPAT4Q86UL3 456 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 COMTD1Q86VU5 262 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 P2RY8Q86VZ1 359 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 OR2T12Q8NG77 320 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 OR9K2Q8NGE7 335 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 OR6S1Q8NH40 331 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 TMEM45BQ96B21 275 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 S100PBPQ96BU1 408 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 SLC25A36Q96CQ1 311 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 PIK3IP1Q96FE7 263 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 ZNF583Q96ND8 569 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 PLEKHF2Q9H8W4 249 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 ASB6Q9NWX5 421 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 UPB1Q9UBR1 384 aa11.85□□□□□ -0.51
CLK3-213ENST00000563842 HRNRQ86YZ3 2850 aaPredicted RBP11.85□□□□□ -0.51
CLK3-213ENST00000563842 CADP27708 2225 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 FBN3Q75N90 2809 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 CIB4A0PJX0 185 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 ELOVL7A1L3X0 281 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 OR6C65A6NJZ3 312 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 DEFB108AA8MXU0 73 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 M0R3H8 397 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 CHP2O43745 196 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 RAMP1O60894 148 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 RAF1P04049 648 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 THBDP07204 575 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 COX5AP20674 150 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 CD247P20963 164 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 DRD4P21917 467 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 PRDX6P30041 224 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 GNGT1P63211 74 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 TGFBR3Q03167 851 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 EGR4Q05215 589 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 KEAP1Q14145 624 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 PAMR1Q6UXH9 720 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 HACD2Q6Y1H2 254 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 AAED1Q7RTV5 226 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 WFDC8Q8IUA0 241 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 MICU2Q8IYU8 434 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 POMGNT2Q8NAT1 580 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 GPR32P1Q8NGA4 272 aa11.84□□□□□ -0.51
CLK3-213ENST00000563842 OR6T1Q8NGN1 323 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms