RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 DPP4P27487 766 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 KIAA1024LP59773 190 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 SGCGQ13326 291 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 ZC3H14Q6PJT7 736 aaKnown RBP12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 SLC7A5P2Q9GIP4 190 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 DUSP22Q9NRW4 184 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 TAS2R5Q9NYW4 299 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 SERGEFQ9UGK8 458 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 DAPP1Q9UN19 280 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 ADAM18Q9Y3Q7 739 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 KCNMB2Q9Y691 235 aa12.84□□□□□ -0.35
VPS9D1-202ENST00000561976 TRBV23OR9-2A0A075B6M9 112 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 A0A1W2PP55 124 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 ARPC5O15511 151 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 GNRH1P01148 92 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 PROS1P07225 676 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 NGFRP08138 427 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 AK4P27144 223 aaPredicted RBP12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 FGL2Q14314 439 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 TUSC1Q2TAM9 212 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 GAB4Q2WGN9 574 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 ARSKQ6UWY0 536 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 NHLRC1Q6VVB1 395 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 NUDT18Q6ZVK8 323 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 ZAR1Q86SH2 424 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 PCDHGA5Q9Y5G8 931 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 COLEC10Q9Y6Z7 277 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 A0A1B0GVT2 93 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 ANKRD20A5PA0PJZ0 165 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 MCIDASD6RGH6 385 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 TRIM77I1YAP6 450 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 GPRIN2O60269 458 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 NDUFB2O95178 105 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 IFNA16P05015 189 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 CPN1P15169 458 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 PTH2RP49190 550 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 P2RX1P51575 399 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 UNQ9370/PRO34162Q6UXP9 181 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 EID2Q8N6I1 236 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 OR52B4Q8NGK2 314 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 OR6M1Q8NGM8 313 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 THEM6Q8WUY1 208 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 NMNAT3Q96T66 252 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 GINS4Q9BRT9 223 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 REG4Q9BYZ8 158 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 TTYH1Q9H313 450 aaPredicted RBP12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 ANKRD10Q9NXR5 420 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 CHRNA9Q9UGM1 479 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 SERTAD3Q9UJW9 196 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 FBXL21Q9UKT6 434 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 FOXJ3Q9UPW0 622 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 CA5BQ9Y2D0 317 aa12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 MKI67P46013 3256 aaKnown RBP12.83□□□□□ -0.36
VPS9D1-202ENST00000561976 MFSD2BA6NFX1 497 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 TEX46H3BTG2 121 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 P2RX6O15547 441 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 BRINP1O60477 761 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 CDK2P24941 298 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ITGB8P26012 769 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 DHODHQ02127 395 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 OC90Q02509 493 aaPredicted RBP12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 PLAURQ03405 335 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 CST6Q15828 149 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 FHL5Q5TD97 284 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 SHISA5Q8N114 240 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 OR14A16Q8NHC5 309 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNRF4Q8WWF5 429 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ST8SIA4Q92187 359 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 KLHL15Q96M94 604 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 C2orf42Q9NWW7 574 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 OR5V1Q9UGF6 321 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF281Q9Y2X9 895 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ATP6V1G2-DDX39BF2Z307 99 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 IMPA2O14732 288 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 SULT1B1O43704 296 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 RP2O75695 350 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 RPP14O95059 124 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ART1P52961 327 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 PPP2CBP62714 309 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 PPP2CAP67775 309 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ILF3Q12906 894 aaKnown RBP eCLIP12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ZNF626Q68DY1 528 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 FBXO42Q6P3S6 717 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 FAM122CQ6P4D5 195 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 VITQ6UXI7 678 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 PHYHIPQ92561 330 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 SMARCD2Q92925 531 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 WBP1Q96G27 269 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 GPR174Q9BXC1 333 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 ICAM5Q9UMF0 924 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 SLC22A7Q9Y694 548 aa12.82□□□□□ -0.36
VPS9D1-202ENST00000561976 FXYD6-FXYD2A0A087WZ82 144 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms