RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 FAM26EQ8N5C1 309 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 LRRC17Q8N6Y2 441 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 TCEANCQ8N8B7 351 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 FAM98AQ8NCA5 519 aaKnown RBP9.31□□□□□ -0.92
USP3-219ENST00000561326 MDS2Q8NDY4 140 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 TSPAN14Q8NG11 270 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 OR8D4Q8NGM9 314 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 OR5J2Q8NH18 312 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 CNIH3Q8TBE1 160 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 POC1BQ8TC44 478 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 UBE2FQ969M7 185 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 MOGAT1Q96PD6 335 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 IL4I1Q96RQ9 567 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PLA2G12AQ9BZM1 189 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 MCCC2Q9HCC0 563 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 KLHL1Q9NR64 748 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 DEPPQ9NTK1 212 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 ZNF226Q9NYT6 803 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 RPH3AQ9Y2J0 694 aaPredicted RBP9.31□□□□□ -0.92
USP3-219ENST00000561326 SSUH2Q9Y2M2 353 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 HIF3AQ9Y2N7 669 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 SLC6A5Q9Y345 797 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 HDGFL3Q9Y3E1 203 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 PCDHGB5Q9Y5G0 923 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 ZNF407Q9C0G0 2248 aa9.31□□□□□ -0.92
USP3-219ENST00000561326 ALPK2Q86TB3 2170 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 TRAV17A0A0B4J275 112 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 ZC3H12DA2A288 527 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 RIIAD1A6NNX1 92 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 B4DXG7 233 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 PTGES3LE9PB15 166 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 SLC1A7O00341 560 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 TLX2O43763 284 aaPredicted RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 FAM20BO75063 409 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 PAICSP22234 425 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 TCEA1P23193 301 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 FMO3P31513 532 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 EIF2S3P41091 472 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 TNFSF10P50591 281 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 GABARAPL2P60520 117 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 RAC1P63000 192 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 FOXK2Q01167 660 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 SGCBQ16585 318 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 CTU2Q2VPK5 515 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 TMEM176BQ3YBM2 270 aaPredicted RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 ALG10Q5BKT4 473 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 ZNF766Q5HY98 468 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 C1QL3Q5VWW1 255 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 ARHGAP11AQ6P4F7 1023 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 H1FNTQ75WM6 255 aaPredicted RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 GALNTL5Q7Z4T8 443 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 SLC22A16Q86VW1 577 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 CCDC71Q8IV32 467 aaPredicted RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 SPACA3Q8IXA5 215 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 IQCF1Q8N6M8 205 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 SCAIQ8N9R8 606 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 TMEM163Q8TC26 289 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 IPCEF1Q8WWN9 437 aaPredicted RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 RFKQ969G6 155 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 MYDGFQ969H8 173 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 ZNF566Q969W8 418 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 ERMAPQ96PL5 475 aaPredicted RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 SMAD5Q99717 465 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 OR11A1Q9GZK7 315 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 CCNB1IP1Q9NPC3 277 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 PLCXD1Q9NUJ7 323 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 QPCTLQ9NXS2 382 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 MRPL39Q9NYK5 338 aaKnown RBP9.3□□□□□ -0.92
USP3-219ENST00000561326 IL20RAQ9UHF4 553 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 KLHL21Q9UJP4 597 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 TRAPPC4Q9Y296 219 aa9.3□□□□□ -0.92
USP3-219ENST00000561326 A0A0G2JMM0 328 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 A0A1W2PPB8 328 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 A0A1W2PRS3 328 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 OR2M5A3KFT3 312 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 EFCAB10A6NFE3 127 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 LRRC3CA6NJW4 275 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 KIR3DP1A8MWS1 328 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 LRRN3E7EW58 273 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 H3BML4 177 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 MKRN2OSH3BPM6 223 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ACOT7O00154 380 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 SULT2B1O00204 365 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 BHLHE40O14503 412 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 IMPA2O14732 288 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ARPC3O15145 178 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 SURF4O15260 269 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 EFNA2O43921 213 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 MRPS14O60783 128 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 WBP4O75554 376 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 SMNDC1O75940 238 aaKnown RBP eCLIP9.29□□□□□ -0.924e-9■■■□□ 17.4
USP3-219ENST00000561326 PPP1R3DO95685 299 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 CLPTM1O96005 669 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 CD14P08571 375 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ADRB1P08588 477 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 ADORA3P0DMS8 318 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 APEHP13798 732 aaKnown RBP9.29□□□□□ -0.92
USP3-219ENST00000561326 GABRB1P18505 474 aa9.29□□□□□ -0.92
USP3-219ENST00000561326 CRHBPP24387 322 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms