RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 KCNAB3O43448 404 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 FCGR3BO75015 233 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 STX11O75558 287 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 LGALS2P05162 132 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 HOXC6P09630 235 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ATXN1LP0C7T5 689 aaKnown RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 G6PDP11413 515 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 NDUFB7P17568 137 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 SOX3P41225 446 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 CTSCP53634 463 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 IL18Q14116 193 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 SPIN4Q56A73 249 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 BEX5Q5H9J7 111 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 LCE2DQ5TA82 110 aaPredicted RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 NCR3LG1Q68D85 454 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 RGMBQ6NW40 437 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ALKAL2Q6UX46 152 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF852Q6ZMS4 543 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 LDLRAD3Q86YD5 345 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 LINC01465Q8N7H1 131 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 NANOGP1Q8N7R0 232 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 C12orf29Q8N999 325 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 BBS1Q8NFJ9 593 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 B3GNT7Q8NFL0 401 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 OR14A16Q8NHC5 309 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 LURAP1Q96LR2 239 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 MYNNQ9NPC7 610 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 NDUFB11Q9NX14 153 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 OR6C2Q9NZP2 312 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 VAPAQ9P0L0 249 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF236Q9UL36 1845 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ARHGEF33A8MVX0 844 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 RBBP9O75884 186 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 TOXO94900 526 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 PAK4O96013 591 aaPredicted RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 OTCP00480 354 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 HPP00738 406 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ADRA2AP08913 450 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 CXCL2P19875 107 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 DCDP81605 110 aaKnown RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 SLAQ13239 276 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF730Q6ZMV8 503 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 Q6ZPB1 254 aaPredicted RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 PID1Q7Z2X4 250 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 SKA3Q8IX90 412 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 FAM126BQ8IXS8 530 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 AMER3Q8N944 861 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 TRPV1Q8NER1 839 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 OR14K1Q8NGZ2 314 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM163Q8TC26 289 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 NETO1Q8TDF5 533 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ZCCHC14Q8WYQ9 949 aaKnown RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 OSTF1Q92882 214 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ADIPOR1Q96A54 375 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 RASD2Q96D21 266 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 PEX11GQ96HA9 241 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC41A2Q96JW4 573 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 FCRL1Q96LA6 429 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 MAP3K3Q99759 626 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 CCM2Q9BSQ5 444 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM231Q9H6L2 316 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 CHMP1AQ9HD42 196 aaPredicted RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 NUDT15Q9NV35 164 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 OSER1Q9NX31 292 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 MS4A12Q9NXJ0 267 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF226Q9NYT6 803 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 COPS7AQ9UBW8 275 aa6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 MRTO4Q9UKD2 239 aaKnown RBP6.18□□□□□ -1.42
TSPAN3-209ENST00000560715 CCL15-CCL14A0A0B4J2E2 113 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 A0A0G2JNJ9 132 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 A0A1B0GW55 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 PLSCR5A0PG75 271 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 GXYLT2A0PJZ3 443 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 C9orf170A2RU37 121 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 OR6C68A6NDL8 312 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 OR52A4PA6NMU1 304 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 ERI2A8K979 691 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 GRXCR1A8MXD5 290 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SHISA8B8ZZ34 492 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 GASTP01350 101 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4L2P0CJ85 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4L3P0CJ86 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4L4P0CJ87 422 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4L5P0CJ88 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4L6P0CJ89 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 DUX4L7P0CJ90 424 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 PKMP14618 531 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 WARSP23381 471 aaKnown RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 MPZP25189 248 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 EVX1P49640 407 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 NDUFV1P49821 464 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC37A1P57057 533 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 AP1S1P61966 158 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 ZNF155Q12901 538 aaPredicted RBP6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 CCL15Q16663 113 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM17Q86X19 198 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 SVBPQ8N300 66 aa6.17□□□□□ -1.42
TSPAN3-209ENST00000560715 PLA2G15Q8NCC3 412 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms