RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 NR1H4Q96RI1 486 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 EPYCQ99645 322 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 MCHR1Q99705 422 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 RSPO3Q9BXY4 272 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 MAGIXQ9H6Y5 334 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 FANCFQ9NPI8 374 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 RAB26Q9ULW5 256 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 USP9XQ93008 2570 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 FLNCQ14315 2725 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 A0A087WUJ7 227 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 A0A1B0GWA3 101 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 TMEM72A0PK05 275 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 FRS3O43559 492 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 CHP2O43745 196 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 SS18L1O75177 396 aaPredicted RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 NPIPB7O75200 414 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 PRKD3O94806 890 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 SERPINA1P01009 418 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 CD8BP10966 210 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 BMP5P22003 454 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 HTR2AP28223 471 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 SHC1P29353 583 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 IDUAP35475 653 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 ASCL1P50553 236 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 CHRNB3Q05901 458 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 GUSBP1Q15486 140 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 OR1Q1Q15612 314 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 NCCRP1Q6ZVX7 275 aaPredicted RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 CBLL1Q75N03 491 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 CCDC71Q8IV32 467 aaPredicted RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 GALNT4Q8N4A0 578 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 PACRGLQ8N7B6 248 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 OR6T1Q8NGN1 323 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 OR6K3Q8NGY3 331 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 PIGXQ8TBF5 258 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 GEMIN6Q8WXD5 167 aaKnown RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 INTS12Q96CB8 462 aaKnown RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 CIB1Q99828 191 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 NAA11Q9BSU3 229 aaPredicted RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 TAPBPLQ9BX59 468 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 NTN4Q9HB63 628 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 JKAMPQ9P055 326 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 PLEKHB1Q9UF11 243 aaPredicted RBP12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 SH3GLB1Q9Y371 365 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 V9GYQ6 96 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 PCNX1Q96RV3 2341 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 LRRK2Q5S007 2527 aa12.51□□□□□ -0.41
PKNOX1-209ENST00000560448 A0A1W2PNR3 127 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 TRAPPC13A5PLN9 417 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 HTR3EA5X5Y0 456 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 SAC3D1A6NKF1 404 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 SOCS2O14508 198 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 MSTNO14793 375 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 CLOCKO15516 846 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 CYTIPO60759 359 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 FZD7O75084 574 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 TNFSF13O75888 250 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 AQP8O94778 261 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 VAMP5O95183 116 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 AHSA1O95433 338 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 MT-ND1P03886 318 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 SEMG1P04279 462 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 HOXB6P17509 224 aaKnown RBP12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 HSPA13P48723 471 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 CTBP2P56545 445 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 H3F3AP84243 136 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 PAQR6Q6TCH4 344 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 ZBTB49Q6ZSB9 765 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 FKBP9P1Q75LS8 142 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 COMTD1Q86VU5 262 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 MFSD8Q8NHS3 518 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 ADAMTS16Q8TE57 1224 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 PYURFQ96I23 114 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 ARL5BQ96KC2 179 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 C9orf16Q9BUW7 83 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 SRXN1Q9BYN0 137 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 SLC19A3Q9BZV2 496 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 VCXQ9H320 206 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 BCO1Q9HAY6 547 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 EMC3Q9P0I2 261 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 KLHL13Q9P2N7 655 aa12.5□□□□□ -0.41
PKNOX1-209ENST00000560448 ZNF724A8MTY0 619 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 PRSS44E7EML9 344 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 M0R3H8 397 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 DLGAP1O14490 977 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 GPR171O14626 319 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 OR5F1O95221 314 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 CLDN1O95832 211 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 IGF2P01344 180 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 OPN1LWP04000 364 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 MED21Q13503 144 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 IFI44LQ53G44 452 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 ENTPD8Q5MY95 495 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 TMEM201Q5SNT2 666 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 FAM69AQ5T7M9 428 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 C1orf140Q5VVS0 124 aa12.49□□□□□ -0.41
PKNOX1-209ENST00000560448 ABLIM2Q6H8Q1 611 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms