RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 COQ10BQ9H8M1 238 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 SLC6A13Q9NSD5 602 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 ZNF701Q9NV72 531 aaPredicted RBP12.09□□□□□ -0.47
SMAD3-214ENST00000560402 KLHL13Q9P2N7 655 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 USP22Q9UPT9 525 aa12.09□□□□□ -0.47
SMAD3-214ENST00000560402 C5orf58C9J3I9 102 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 PRKD3O94806 890 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 HMGN2P05204 90 aaKnown RBP12.08□□□□□ -0.48
SMAD3-214ENST00000560402 KDELR2P33947 212 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 CARD18P57730 90 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF117Q03924 483 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 SELENBP1Q13228 472 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 DCST2Q5T1A1 773 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 CCNJQ5T5M9 372 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 HMBOX1Q6NT76 420 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 TFAP2EQ6VUC0 442 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 ZDHHC13Q8IUH4 622 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 SLC43A2Q8N370 569 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 PNPT1Q8TCS8 783 aaKnown RBP12.08□□□□□ -0.48
SMAD3-214ENST00000560402 PHOSPHO1Q8TCT1 267 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 OSTF1Q92882 214 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 CDS1Q92903 461 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 NPAS1Q99742 590 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 ACTRT3Q9BYD9 372 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 TMEM38AQ9H6F2 299 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 C12orf49Q9H741 205 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 TMEM185BQ9H7F4 350 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 NGBQ9NPG2 151 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 ORC6Q9Y5N6 252 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 ZANQ9Y493 2812 aa12.08□□□□□ -0.48
SMAD3-214ENST00000560402 E2F6O75461 281 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 CNOT4O95628 575 aaKnown RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 NUDT14O95848 222 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 HPRP00739 348 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 CST1P01037 141 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 EFNA1P20827 205 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 SFTPDP35247 375 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 DSTNP60981 165 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 RPS4XP62701 263 aaKnown RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 PPP2R2BQ00005 443 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 GNA13Q14344 377 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 PDK3Q15120 406 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 ETFDHQ16134 617 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 KRT80Q6KB66 452 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 ADAM5Q6NVV9 412 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 EIF3MQ7L2H7 374 aaKnown RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 SSX8Q7RTT4 187 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 PATL1Q86TB9 770 aaKnown RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 GABRG1Q8N1C3 465 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 CIARTQ8N365 385 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 CBR4Q8N4T8 237 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 ADAMTS15Q8TE58 950 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 ABHD3Q8WU67 409 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 OTUB1Q96FW1 271 aaPredicted RBP12.07□□□□□ -0.48
SMAD3-214ENST00000560402 C16orf58Q96GQ5 468 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 MRGPRX4Q96LA9 322 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 RDH12Q96NR8 316 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 POTEKPQ9BYX7 375 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 FBXO34Q9NWN3 711 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 ICAM5Q9UMF0 924 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 OAZ3Q9UMX2 235 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 RNF115Q9Y4L5 304 aa12.07□□□□□ -0.48
SMAD3-214ENST00000560402 NUP214P35658 2090 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 TRIM64A6NGJ6 449 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 TRIM64BA6NI03 449 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 SMAD7O15105 426 aaKnown RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 EIF4E2O60573 245 aaKnown RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 GCM2O75603 506 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 AK1P00568 194 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 FABP3P05413 133 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 ZNF26P17031 533 aaPredicted RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 IL32P24001 234 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 CCT3P49368 545 aaKnown RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 CHN2P52757 468 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 ATP12AP54707 1039 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 ATP5J2P56134 94 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 TP53BP2Q13625 1128 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 BLMHQ13867 455 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 SCARB2Q14108 478 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 NRF1Q16656 503 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 KLHL26Q53HC5 615 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 SLC25A53Q5H9E4 307 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 C3orf33Q6P1S2 294 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 CBLL1Q75N03 491 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 FCRLAQ7L513 359 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 HIPK1Q86Z02 1210 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 ZDHHC21Q8IVQ6 265 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 CLEC4FQ8N1N0 589 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 TOR1AIP2Q8NFQ8 470 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 S100PBPQ96BU1 408 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 NEURL3Q96EH8 262 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 SRXN1Q9BYN0 137 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 ESRP2Q9H6T0 727 aaKnown RBP12.06□□□□□ -0.48
SMAD3-214ENST00000560402 KLHL9Q9P2J3 617 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 FREM1Q5H8C1 2179 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 USF3Q68DE3 2245 aa12.06□□□□□ -0.48
SMAD3-214ENST00000560402 NPIPB9F8W1W9 429 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 G3V2T6 193 aa12.05□□□□□ -0.48
SMAD3-214ENST00000560402 GTPBP1O00178 669 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms