RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 OR2M7Q8NG81 312 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 OR5M1Q8NGP8 315 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 OR51A7Q8NH64 312 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 FANK1Q8TC84 345 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 LIPHQ8WWY8 451 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 UBE2FQ969M7 185 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 TAAR8Q969N4 342 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 PLEKHA8Q96JA3 519 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 SAMD8Q96LT4 415 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 TNFRSF13CQ96RJ3 184 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 TSSK6Q9BXA6 273 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 HES7Q9BYE0 225 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 OR52D1Q9H346 318 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 SLC25A19Q9HC21 320 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 ZFP64Q9NPA5 681 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 KLHL1Q9NR64 748 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 SERINC1Q9NRX5 453 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 DKKL1Q9UK85 242 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 BOKQ9UMX3 212 aaPredicted RBP10.15□□□□□ -0.79
USP3-218ENST00000560202 ZNF337Q9Y3M9 751 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 CELSR3Q9NYQ7 3312 aa10.15□□□□□ -0.79
USP3-218ENST00000560202 BOLA2-SMG1P6H3BVE0 249 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 MAGEB3O15480 346 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 NME2P1O60361 137 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 ZIC3O60481 467 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 INHBBP09529 407 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 CD46P15529 392 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 BMP7P18075 431 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 IL11P20809 199 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 NME2P22392 152 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 PLA2G5P39877 138 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 SMSP52788 366 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 FXYD6P3P58550 94 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 FHL1Q13642 323 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 RGS21Q2M5E4 152 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 CTU2Q2VPK5 515 aaKnown RBP10.14□□□□□ -0.79
USP3-218ENST00000560202 CLEC12AQ5QGZ9 265 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 C1orf140Q5VVS0 124 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 ACSM5Q6NUN0 579 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 SLC27A4Q6P1M0 643 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 IGFL2Q6UWQ7 119 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 CASP12Q6UXS9 341 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 SULF2Q8IWU5 870 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 ENTHD1Q8IYW4 607 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 ZNF786Q8N393 782 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 GTPBP8Q8N3Z3 284 aaPredicted RBP10.14□□□□□ -0.79
USP3-218ENST00000560202 FBLIM1Q8WUP2 373 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 C5orf34Q96MH7 638 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 MOGAT1Q96PD6 335 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 PTDSS2Q9BVG9 487 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 OR11A1Q9GZK7 315 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.14□□□□□ -0.79
USP3-218ENST00000560202 MCCC2Q9HCC0 563 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 NANSQ9NR45 359 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 IMPAD1Q9NX62 359 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 IL20RAQ9UHF4 553 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 RNF6Q9Y252 685 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 RPH3AQ9Y2J0 694 aaPredicted RBP10.14□□□□□ -0.79
USP3-218ENST00000560202 KLF13Q9Y2Y9 288 aaPredicted RBP10.14□□□□□ -0.79
USP3-218ENST00000560202 DOCK10Q96BY6 2186 aa10.14□□□□□ -0.79
USP3-218ENST00000560202 SPTBN2O15020 2390 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 RRP8O43159 456 aaKnown RBP10.13□□□□□ -0.79
USP3-218ENST00000560202 AHSA1O95433 338 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 BGLAPP02818 100 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 RFPL3SP0C7P2 107 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ASAH2BP0C7U1 165 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ELK4P28324 431 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 SRD5A2P31213 254 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 RPS3AP61247 264 aaKnown RBP10.13□□□□□ -0.79
USP3-218ENST00000560202 CDK5R2Q13319 367 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 MAD2L1BPQ15013 274 aaPredicted RBP10.13□□□□□ -0.79
USP3-218ENST00000560202 TOMM20Q15388 145 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 TMEM44Q2T9K0 475 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.13□□□□□ -0.79
USP3-218ENST00000560202 GLYR1Q49A26 553 aaPredicted RBP10.13□□□□□ -0.79
USP3-218ENST00000560202 FAM69AQ5T7M9 428 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 C3orf33Q6P1S2 294 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 GALNTL5Q7Z4T8 443 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ATP6V1C2Q8NEY4 427 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 OR2T33Q8NG76 320 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 OR52L1Q8NGH7 329 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 OR4Q3Q8NH05 313 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 RHOXF1Q8NHV9 184 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 DDIT4LQ96D03 193 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 DCBLD2Q96PD2 775 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 UBL7Q96S82 380 aaPredicted RBP10.13□□□□□ -0.79
USP3-218ENST00000560202 ENKD1Q9H0I2 346 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 UBQLN3Q9H347 655 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 FKRPQ9H9S5 495 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 RASSF1Q9NS23 344 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ZNF226Q9NYT6 803 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 AASSQ9UDR5 926 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ZNF229Q9UJW7 825 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 SPIN1Q9Y657 262 aaPredicted RBP10.13□□□□□ -0.79
USP3-218ENST00000560202 CPAMD8Q8IZJ3 1885 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 ZFHX4Q86UP3 3567 aa10.13□□□□□ -0.79
USP3-218ENST00000560202 PIEZO1Q92508 2521 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 H3BML4 177 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 KLRC4-KLRK1H3BQV0 150 aa10.12□□□□□ -0.79
USP3-218ENST00000560202 M0R129 80 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms