RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 THAP5Q7Z6K1 395 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 SLC43A2Q8N370 569 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 SETD9Q8NE22 299 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 MFSD8Q8NHS3 518 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 TSSK6Q9BXA6 273 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 TMEM185BQ9H7F4 350 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 QPCTLQ9NXS2 382 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 DNAJC13O75165 2243 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 ZNF407Q9C0G0 2248 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 FZD7O75084 574 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 PDGFAP04085 211 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 BMP7P18075 431 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 MAGEA5P43359 124 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 SMSP52788 366 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 TPD52P55327 224 aaPredicted RBP10.98□□□□□ -0.65
HERC1-205ENST00000559886 PPIAP62937 165 aaKnown RBP10.98□□□□□ -0.65
HERC1-205ENST00000559886 RAC1P63000 192 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 WIPI1Q5MNZ9 446 aaPredicted RBP10.98□□□□□ -0.65
HERC1-205ENST00000559886 CLEC12AQ5QGZ9 265 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 SLC6A19Q695T7 634 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 KRT80Q6KB66 452 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 ACSM5Q6NUN0 579 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 THSD4Q6ZMP0 1018 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 MAMDC2Q7Z304 686 aaPredicted RBP10.98□□□□□ -0.65
HERC1-205ENST00000559886 SLC22A16Q86VW1 577 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 IQCF1Q8N6M8 205 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 ZCCHC14Q8WYQ9 949 aaKnown RBP10.98□□□□□ -0.65
HERC1-205ENST00000559886 DNAJA3Q96EY1 480 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 ADNPQ9H2P0 1102 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 IL20RAQ9UHF4 553 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 HIF3AQ9Y2N7 669 aa10.98□□□□□ -0.65
HERC1-205ENST00000559886 KIAA1549Q9HCM3 1950 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 FAM166BA8MTA8 275 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 IMPDH2P12268 514 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 SHC1P29353 583 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 UQCRC1P31930 480 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 IDUAP35475 653 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 GFRA1P56159 465 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 NUP107P57740 925 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 PRPS1P60891 318 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 CDC42P60953 191 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 MYBPHQ13203 477 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 MFSD13AQ14CX5 517 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 TMEM176BQ3YBM2 270 aaPredicted RBP10.97□□□□□ -0.65
HERC1-205ENST00000559886 OR2T33Q8NG76 320 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 OR52L1Q8NGH7 329 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 OR4Q3Q8NH05 313 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 FAM81AQ8TBF8 368 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 FBLIM1Q8WUP2 373 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 SLC25A36Q96CQ1 311 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 HDGFL3Q9Y3E1 203 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 LIPT2A6NK58 231 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 LINC01387J3KSC0 135 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 BHLHE40O14503 412 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 NDUFB2O95178 105 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 OPN1LWP04000 364 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 HIST1H2ABP04908 130 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 ITGB2P05107 769 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 CELA3AP09093 270 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 GRPRP30550 384 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 SFTPDP35247 375 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 ZNF169Q14929 603 aaPredicted RBP10.97□□□□□ -0.65
HERC1-205ENST00000559886 UGT2A3Q6UWM9 527 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 Q6ZS92 163 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 HIST3H2AQ7L7L0 130 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 DEPDC4Q8N2C3 294 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 FAM98AQ8NCA5 519 aaKnown RBP10.97□□□□□ -0.65
HERC1-205ENST00000559886 EXTL1Q92935 676 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 HIST1H2ACQ93077 130 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 UBE2FQ969M7 185 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 RELTQ969Z4 430 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 SFXN2Q96NB2 322 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 NR1H4Q96RI1 486 aaPredicted RBP10.97□□□□□ -0.65
HERC1-205ENST00000559886 CORINQ9Y5Q5 1042 aa10.97□□□□□ -0.65
HERC1-205ENST00000559886 BLOC1S5-TXNDC5H3BN57 136 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 K7EM74 188 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 ACOT7O00154 380 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 SLC6A6P31641 620 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 CXADRP78310 365 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 IL5RAQ01344 420 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 CD47Q08722 323 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 C19orf57Q0VDD7 668 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 OR7A5Q15622 319 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 SGCBQ16585 318 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 PGGHGQ32M88 737 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 GXYLT1Q4G148 440 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 RNFT1Q5M7Z0 435 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 CASP12Q6UXS9 341 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 NANOGNBQ7Z5D8 188 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 ENTHD1Q8IYW4 607 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 LNX2Q8N448 690 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 FAM109AQ8N4B1 249 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 OR5J2Q8NH18 312 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 ABHD17AQ96GS6 310 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 OR5B2Q96R09 309 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 ACKR4Q9NPB9 350 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 PNPLA3Q9NST1 481 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 IMPAD1Q9NX62 359 aa10.96□□□□□ -0.65
HERC1-205ENST00000559886 MRPL39Q9NYK5 338 aaKnown RBP10.96□□□□□ -0.65
HERC1-205ENST00000559886 RNF6Q9Y252 685 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms