RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SLC25A12O75746 678 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 IGHA1P01876 353 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 SCG5P05408 212 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 CD14P08571 375 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 LIMS3P0CW19 117 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 LIMS4P0CW20 117 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 HIST1H1CP16403 213 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 PAICSP22234 425 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 OTX2P32243 289 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 RPL4P36578 427 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 AQP2P41181 271 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 APOBEC1P41238 236 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 NBL1P41271 181 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 RPS5P46782 204 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 SSR4P51571 173 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 DNASE1L3Q13609 305 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 SPCS2Q15005 226 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 C1QL3Q5VWW1 255 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 FCRLBQ6BAA4 426 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 PAQR6Q6TCH4 344 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 IGFN1Q86VF2 1251 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 NLGN4YQ8NFZ3 816 aaPredicted RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 OR4F15Q8NGB8 312 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 OR6S1Q8NH40 331 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 OPALINQ96PE5 141 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 TEAD3Q99594 435 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 ZNF649Q9BS31 505 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 DCUN1D5Q9BTE7 237 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 CDCP1Q9H5V8 836 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 SH2D2AQ9NP31 389 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 CHCHD3Q9NX63 227 aaKnown RBP11.5□□□□□ -0.57
USP3-213ENST00000559711 HAO2Q9NYQ3 351 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 HRH3Q9Y5N1 445 aa11.5□□□□□ -0.57
USP3-213ENST00000559711 EP300Q09472 2414 aaPredicted RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 MYL12BO14950 172 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 TNFSF15O95150 251 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 APOL3O95236 402 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 TXNDC12O95881 172 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 HIST1H2ABP04908 130 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 HSMCR30P0CW71 290 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 NR4A1P22736 598 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 F8A1P23610 371 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 MAP2K6P52564 334 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 LIMK1P53667 647 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 Q0VFX4 171 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 C1DQ13901 141 aaKnown RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 GXYLT1Q4G148 440 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ALG10Q5BKT4 473 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 FAM69AQ5T7M9 428 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 C1orf140Q5VVS0 124 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 H3F3CQ6NXT2 135 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 POMZP3Q6PJE2 187 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ARSKQ6UWY0 536 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 IL20RBQ6UXL0 311 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 HIST3H2AQ7L7L0 130 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 FAM122BQ7Z309 247 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 CYB561A3Q8NBI2 242 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ZNF485Q8NCK3 441 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 NPEPL1Q8NDH3 523 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 PSD4Q8NDX1 1056 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 DEFB124Q8NES8 71 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 OR52E2Q8NGJ4 325 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 OR4K13Q8NH42 304 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ZFAND2BQ8WV99 257 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ASB15Q8WXK1 588 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 HIST1H2ACQ93077 130 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 OTULINQ96BN8 352 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 KATNB1Q9BVA0 655 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ISYNA1Q9NPH2 558 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 FBXL4Q9UKA2 621 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ADAM18Q9Y3Q7 739 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 CCRL2O00421 344 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ZNF208O43345 1280 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 OR2T1O43869 369 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 RAD1O60671 282 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 SERPINA7P05543 415 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 FTH1P19P0C7X4 201 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ZNF182P17025 639 aaPredicted RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 ERVK-25P63136 954 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 RPL18Q07020 188 aaKnown RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.49□□□□□ -0.573e-7■■■■□ 20.8
USP3-213ENST00000559711 MLLT11Q13015 90 aaPredicted RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 MAMDC2Q7Z304 686 aaPredicted RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 NANOGNBQ7Z5D8 188 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ATCAYQ86WG3 371 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 FADS6Q8N9I5 356 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 WDSUB1Q8N9V3 476 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 FAM98AQ8NCA5 519 aaKnown RBP11.49□□□□□ -0.57
USP3-213ENST00000559711 OR2M3Q8NG83 312 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 PAQR8Q8TEZ7 354 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 MRGPRX4Q96LA9 322 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 NPAS1Q99742 590 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 LRFN3Q9BTN0 628 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 ANGPTL4Q9BY76 406 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 NMNAT2Q9BZQ4 307 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 NDEL1Q9GZM8 345 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 OR51V1Q9H2C8 321 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 WDR70Q9NW82 654 aa11.49□□□□□ -0.57
USP3-213ENST00000559711 P4HTMQ9NXG6 502 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms