RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 PRRC1Q96M27 445 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 SECISBP2Q96T21 854 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 PRR14Q9BWN1 585 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 DUSP22Q9NRW4 184 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 NUDT15Q9NV35 164 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 MCTS1Q9ULC4 181 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 PDCD11Q14690 1871 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 TEX13CA0A0J9YWL9 993 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ZNF670-ZNF695F2Z2N8 137 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 NDUFB2O95178 105 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 H2AFB2P0C5Z0 115 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ZNF425Q6IV72 752 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 FAM180AQ6UWF9 173 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 IQCF1Q8N6M8 205 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 TMEM178AQ8NBL3 297 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 HMGCLL1Q8TB92 370 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 MNTQ99583 582 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 RBM24Q9BX46 236 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 TAS2R16Q9NYV7 291 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 B3GALT1Q9Y5Z6 326 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 J3KTA2 159 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 SDHBP21912 280 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 DRD5P21918 477 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 EEF1A1P68104 462 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 ALG10Q5BKT4 473 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 DLEU7Q6UYE1 221 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 SYT14Q8NB59 555 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 NSMAFQ92636 917 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 LMF2Q9BU23 707 aaKnown RBP9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 POLHQ9Y253 713 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 GPR52Q9Y2T5 361 aa9.83□□□□□ -0.84
CARMIL3-202ENST00000559694 LRRN3E7EW58 273 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 LILRB5O75023 590 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 FCER2P06734 321 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 TACR3P29371 465 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 FAPQ12884 760 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 SHFQ7M4L6 423 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 IQCF2Q8IXL9 164 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 SPERTQ8NA61 448 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 PCNPQ8WW12 178 aaKnown RBP9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC35A4Q96G79 324 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 SDF2Q99470 211 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 ARL6Q9H0F7 186 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 NXF5Q9H1B4 397 aaKnown RBP9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 RNF167Q9H6Y7 350 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 APMAPQ9HDC9 416 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 PSORS1C1Q9UIG5 152 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 CAMK2AQ9UQM7 478 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 B8ZZF3 427 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 KLRC4-KLRK1H3BQV0 150 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 UPK1AO00322 258 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 DLL1O00548 723 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 FCMRO60667 390 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 RP2O75695 350 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 HOXD11P31277 338 aaPredicted RBP9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 PPICP45877 212 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 GALEQ14376 348 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 RFPL4BQ6ZWI9 263 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 CNEP1R1Q8N9A8 125 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 CNOT9Q92600 299 aaKnown RBP9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 TCF7L1Q9HCS4 588 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 KLK4Q9Y5K2 254 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 NBASA2RRP1 2371 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 DCDC2BA2VCK2 349 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 ARL6IP5O75915 188 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 PPP1R3DO95685 299 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 EDNRAP25101 427 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 GDI2P50395 445 aaKnown RBP9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 ARFIP1P53367 373 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 CHAF1BQ13112 559 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 PODNL1Q6PEZ8 512 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 LANCL3Q6ZV70 420 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 SLC7A6Q92536 515 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 MBOAT4Q96T53 435 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 LRFN1Q9P244 771 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 GNG8Q9UK08 70 aa9.82□□□□□ -0.84
CARMIL3-202ENST00000559694 A0A0A6YYD5 115 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 KANTRA0A1W2PQU2 76 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 FAM171A2A8MVW0 826 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 OR2J2O76002 312 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 TGM1P22735 817 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 OR12D2P58182 307 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 GALK2Q01415 458 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 CDC20Q12834 499 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 CTF1Q16619 201 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 KLHL26Q53HC5 615 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 LEG1Q6P5S2 330 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 WDR74Q6RFH5 385 aaPredicted RBP9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 KLBQ86Z14 1044 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 ENTHD1Q8IYW4 607 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 KCNE4Q8WWG9 221 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 LRRC46Q96FV0 321 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 TM9SF2Q99805 663 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 VN1R1Q9GZP7 353 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 TAS2R3Q9NYW6 316 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 ASB4Q9Y574 426 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 IER3IP1Q9Y5U9 82 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 A3GALT2U3KPV4 340 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 A0A1W2PPK0 400 aa9.81□□□□□ -0.84
CARMIL3-202ENST00000559694 PRAMEF25A6NGN4 478 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms