RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TMEM120AQ9BXJ8 343 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 RAD21L1Q9H4I0 556 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 A4GALTQ9NPC4 353 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 PLSCR4Q9NRQ2 329 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 GLRX2Q9NS18 164 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 RASSF1Q9NS23 344 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 FGFR1OP2Q9NVK5 253 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 THUMPD1Q9NXG2 353 aaKnown RBP5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 CALML5Q9NZT1 146 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 ING1Q9UK53 422 aaPredicted RBP5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 PROCRQ9UNN8 238 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZNF443Q9Y2A4 671 aaPredicted RBP5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 ATP23Q9Y6H3 246 aa5.36□□□□□ -1.55
CTDSPL2-204ENST00000558966 UQCRHLA0A096LP55 91 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 A0A0G2JPF8 293 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 SH3D21A4FU49 640 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 GJE1A6NN92 205 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 HNRNPCL2B2RXH8 293 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 HNRNPCL3B7ZW38 293 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 FAAHO00519 579 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 HNRNPCL1O60812 293 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 SCGB1D2O95969 90 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 PLGP00747 810 aaPredicted RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 IGHA1P01876 353 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 HPXP02790 462 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 GKN3PP0CG01 181 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 HNRNPCL4P0DMR1 293 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 PRG2P13727 222 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 APOBEC1P41238 236 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 ACAA2P42765 397 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 DIO1P49895 249 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 CTBP2P56545 445 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 RAC3P60763 192 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 GNA13Q14344 377 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 PRAMEF8Q5VWM4 474 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 PRAMEF7Q5VXH5 474 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 ABLIM2Q6H8Q1 611 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 FCRLAQ7L513 359 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 NUFIP2Q7Z417 695 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 ADGRG3Q86Y34 549 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 LURAP1LQ8IV03 231 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 CLIP4Q8N3C7 705 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 DPP10Q8N608 796 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 OR52P1PQ8NH57 321 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 NFKBIDQ8NI38 313 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 SLC25A43Q8WUT9 341 aaPredicted RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 DNAJA3Q96EY1 480 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 ARL5BQ96KC2 179 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 DACH2Q96NX9 599 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 OR5B2Q96R09 309 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 PSD2Q9BQI7 771 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 OR11A1Q9GZK7 315 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 RABEP2Q9H5N1 569 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 CCDC134Q9H6E4 229 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 BCL2L10Q9HD36 194 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 TIGARQ9NQ88 270 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 SERINC1Q9NRX5 453 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 KLHL13Q9P2N7 655 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 CHRNA9Q9UGM1 479 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 LEF1Q9UJU2 399 aaPredicted RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 OSGIN1Q9UJX0 560 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 TESMINQ9Y4I5 508 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 CADP27708 2225 aa5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 PRRC2AP48634 2157 aaKnown RBP5.35□□□□□ -1.55
CTDSPL2-204ENST00000558966 TMED7-TICAM2A0A0A6YYA0 188 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 A0A1W2PPR1 153 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TMEM72A0PK05 275 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TMEM247A6NEH6 219 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CFAP73A6NFT4 308 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 FRS3O43559 492 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 PGM3O95394 542 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 FESP07332 822 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 PABPC4LP0CB38 370 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 POU2F1P14859 743 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 GPX2P18283 190 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 PPIBP23284 216 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 UGT2B10P36537 528 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SLC1A3P43003 542 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 KCNJ5P48544 419 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SCAND1P57086 179 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SF3A3Q12874 501 aaKnown RBP eCLIP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SELPLGQ14242 412 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 RNPS1Q15287 305 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ADRM1Q16186 407 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 EXOC3L2Q2M3D2 409 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 RUNDC3AQ59EK9 446 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 GCNT6Q5T4J0 391 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 METTL21CQ5VZV1 264 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TFAP2EQ6VUC0 442 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TMPPEQ6ZT21 453 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 DHDDSQ86SQ9 333 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 COMTD1Q86VU5 262 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 CDC20BQ86Y33 519 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 TUSC5Q8IXB3 177 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 ZNF440Q8IYI8 595 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 SLC43A2Q8N370 569 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 BBS10Q8TAM1 723 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 REXO5Q96IC2 774 aaKnown RBP5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 WFIKKN1Q96NZ8 548 aa5.34□□□□□ -1.55
CTDSPL2-204ENST00000558966 POLDIP3Q9BY77 421 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms