RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 ZPLD1Q8TCW7 415 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 TBX15Q96SF7 602 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 RNF126Q9BV68 326 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 TRIM62Q9BVG3 475 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 METTL7AQ9H8H3 244 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 NMRAL1Q9HBL8 299 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 NT5MQ9NPB1 228 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 RPS10P5Q9NQ39 176 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 ASF1AQ9Y294 204 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 PLEKHH1Q9ULM0 1364 aa3.24□□□□□ -1.89
CASC4-206ENST00000558847 TP53BP1Q12888 1972 aaPredicted RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 ATP10AO60312 1499 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 IGLV3-10A0A075B6K4 115 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 IGHV3OR16-13A0A075B7E8 117 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 CTAGE15A4D2H0 777 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 K7N7A8 449 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 ABCD4O14678 606 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 LGI1O95970 557 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 IGHV3-48P01763 117 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 HSPB1P04792 205 aaKnown RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 GIG44P09565 113 aaPredicted RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 AQP1P29972 269 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 RDXP35241 583 aaKnown RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 TAGLN2P37802 199 aaKnown RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 DDOSTP39656 456 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 EGFEM1PQ0D2K5 195 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 SCRN3Q0VDG4 424 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 BST2Q10589 180 aaKnown RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 ARFRP1Q13795 201 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 DUSP7Q16829 419 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 NSUN5P1Q3KNT7 163 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 C1orf146Q5VVC0 180 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 CTAGE6Q86UF2 777 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 FAM228AQ86W67 206 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 CDR2LQ86X02 465 aaPredicted RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 PLA2G4DQ86XP0 818 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 SLC22A9Q8IVM8 553 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 FBXO16Q8IX29 292 aaPredicted RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 FNDC5Q8NAU1 212 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 OR51S1Q8NGJ8 323 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 CNOT6LQ96LI5 555 aaKnown RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 ANKRD19PQ9H560 264 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 RANBP3Q9H6Z4 567 aaPredicted RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 THUMPD1Q9NXG2 353 aaKnown RBP3.23□□□□□ -1.89
CASC4-206ENST00000558847 TREM2Q9NZC2 230 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 V9GY05 133 aa3.23□□□□□ -1.89
CASC4-206ENST00000558847 TTC21BQ7Z4L5 1316 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 BTBD17A6NE02 478 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 OR5B21A6NL26 309 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 E7ENQ6 273 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 DYNC1I1O14576 645 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 IGKV3-15P01624 115 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 TNNI1P19237 187 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 TBPP20226 339 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 GDI1P31150 447 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 GLP1RP43220 463 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 YAP1P46937 504 aaKnown RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 GPM6AP51674 278 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 KPNA2P52292 529 aaKnown RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 BIDP55957 195 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 TIMM10P62072 90 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 SELENOTP62341 195 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 ERVK-25P63136 954 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 BST1Q10588 318 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 OR5I1Q13606 314 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 CARD16Q5EG05 197 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 TIGD3Q6B0B8 471 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 METAP1DQ6UB28 335 aaPredicted RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 LRRC31Q6UY01 552 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 RDH10Q8IZV5 341 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 OR10G3Q8NGC4 313 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 OR4K14Q8NGD5 310 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 OR52H1Q8NGJ2 320 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 BRSK1Q8TDC3 778 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 PYROXD1Q8WU10 500 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 RNF139Q8WU17 664 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 TM4SF19Q96DZ7 209 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 CNN2Q99439 309 aaKnown RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 ARHGDIGQ99819 225 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 POLR2J2Q9GZM3 115 aaKnown RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 ILKAPQ9H0C8 392 aaPredicted RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 POLR2J3Q9H1A7 115 aaKnown RBP3.22□□□□□ -1.89
CASC4-206ENST00000558847 PPA2Q9H2U2 334 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 TP53TG3Q9ULZ0 132 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 ABCG2Q9UNQ0 655 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 UGT2A1Q9Y4X1 527 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
CASC4-206ENST00000558847 HEATR9A2RTY3 570 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 GOLGA8OA6NCC3 632 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ZFP92A6NM28 416 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ZNF716A6NP11 495 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 GOLGA8NF8WBI6 632 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 HAT1O14929 419 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 TOM1O60784 492 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 STAMBPO95630 424 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 LY6G6DO95868 133 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 AGTP01019 485 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 UQCRFS1P1P0C7P4 283 aa3.21□□□□□ -1.9
CASC4-206ENST00000558847 ZNF735P0CB33 412 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms