RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 EMC3Q9P0I2 261 aa8.45□□□□□ -1.06
SPG11-212ENST00000558790 PSMC3IPQ9P2W1 217 aaPredicted RBP8.45□□□□□ -1.06
SPG11-212ENST00000558790 MALT1Q9UDY8 824 aa8.45□□□□□ -1.06
SPG11-212ENST00000558790 TBK1Q9UHD2 729 aa8.45□□□□□ -1.06
SPG11-212ENST00000558790 MGAT4BQ9UQ53 548 aa8.45□□□□□ -1.06
SPG11-212ENST00000558790 DTNAQ9Y4J8 743 aa8.45□□□□□ -1.06
SPG11-212ENST00000558790 WNK2Q9Y3S1 2297 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 IGKV3D-15A0A087WSY6 115 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 CIB4A0PJX0 185 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 CCT8L1PA6NM43 557 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 ZNF716A6NP11 495 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 TMEM233B4DJY2 109 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 AZIN1O14977 448 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 RIPK2O43353 540 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 EIF4E2O60573 245 aaKnown RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 GLRA3O75311 464 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 ITGA5P08648 1049 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 LINC00032P0C843 101 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 LAMP1P11279 417 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 BCKDHAP12694 445 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 GZMKP49863 264 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 EFNA4P52798 201 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 FOXG1P55316 489 aaPredicted RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 DNAJB13P59910 316 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 NAA20P61599 178 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 PHC1P78364 1004 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 SLC25A3Q00325 362 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 GGTLC2Q14390 218 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 SYT14P1Q58G82 188 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 KANK2Q63ZY3 851 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 FAM166AQ6J272 317 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 ZNF544Q6NX49 715 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 OR56A1Q8NGH5 318 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 OR5D16Q8NGK9 328 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 OR5AK3PQ8NH89 298 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 ADAMTS15Q8TE58 950 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 ST8SIA1Q92185 356 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 PROX1Q92786 737 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 APH1AQ96BI3 265 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 MSI2Q96DH6 328 aaKnown RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 MTERF3Q96E29 417 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 DNAJA3Q96EY1 480 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 THUMPD3Q9BV44 507 aaKnown RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 C1QTNF6Q9BXI9 259 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 HOXD1Q9GZZ0 328 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 C12orf65Q9H3J6 166 aaKnown RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 EML4Q9HC35 981 aaKnown RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 TAS2R16Q9NYV7 291 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 GIMAP2Q9UG22 337 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 DCDC2Q9UHG0 476 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 KCNS2Q9ULS6 477 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 NOSIPQ9Y314 301 aaKnown RBP8.44□□□□□ -1.06
SPG11-212ENST00000558790 TMED5Q9Y3A6 229 aa8.44□□□□□ -1.06
SPG11-212ENST00000558790 A0A1W2PPM1 405 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 SERINC4A6NH21 518 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 VWC2LB2RUY7 222 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 ATP6V1G2-DDX39BF2Z307 99 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 SULT2B1O00204 365 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 PLIN3O60664 434 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 CYP7B1O75881 506 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 C6orf47O95873 294 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 CFPP27918 469 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 ASMTP46597 345 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 CCT3P49368 545 aaKnown RBP8.43□□□□□ -1.06
SPG11-212ENST00000558790 SESN3P58005 492 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 CSNK2A1P68400 391 aaPredicted RBP8.43□□□□□ -1.06
SPG11-212ENST00000558790 MERTKQ12866 999 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 PTGR1Q14914 329 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 GABRA6Q16445 453 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 SPDYE7PQ495Y7 208 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 C9orf135Q5VTT2 229 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 BHLHB9Q6PI77 547 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 RNF165Q6ZSG1 346 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 TMPPEQ6ZT21 453 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 OLIG3Q7RTU3 272 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 R3HCC1LQ7Z5L2 792 aaKnown RBP8.43□□□□□ -1.06
SPG11-212ENST00000558790 CMIPQ8IY22 773 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 OR52E4Q8NGH9 312 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 PSMA8Q8TAA3 256 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 SFXN5Q8TD22 340 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 C3orf49Q96BT1 292 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 SORCS2Q96PQ0 1159 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 OR7D2Q96RA2 312 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 FOXB1Q99853 325 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 PIMREGQ9BSJ6 248 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 SERHL2Q9H4I8 314 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 ASB6Q9NWX5 421 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 ATP6V1HQ9UI12 483 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 KCNE5Q9UJ90 142 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 FAF1Q9UNN5 650 aaPredicted RBP8.43□□□□□ -1.06
SPG11-212ENST00000558790 DNAJC15Q9Y5T4 150 aa8.43□□□□□ -1.06
SPG11-212ENST00000558790 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.43□□□□□ -1.06
SPG11-212ENST00000558790 IGHV4-61A0A0C4DH41 118 aa8.42□□□□□ -1.06
SPG11-212ENST00000558790 PDLIM1O00151 329 aa8.42□□□□□ -1.06
SPG11-212ENST00000558790 PIP5K1BO14986 540 aa8.42□□□□□ -1.06
SPG11-212ENST00000558790 BCAS1O75363 584 aaPredicted RBP8.42□□□□□ -1.06
SPG11-212ENST00000558790 URI1O94763 535 aaPredicted RBP8.42□□□□□ -1.06
SPG11-212ENST00000558790 KNG1P01042 644 aa8.42□□□□□ -1.06
SPG11-212ENST00000558790 KRT16P08779 473 aa8.42□□□□□ -1.06
SPG11-212ENST00000558790 UBTFL6P0CB48 400 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms