RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 DBIP07108 87 aaKnown RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 CHRM4P08173 479 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 NR2F1P10589 423 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 IL7RP16871 459 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 RPS4Y1P22090 263 aaKnown RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 PCSK6P29122 969 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 EPHA3P29320 983 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 GNALP38405 381 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 MAP2K6P52564 334 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 NME5P56597 212 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 OR2B6P58173 313 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 UFM1P61960 85 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 CHRNEQ04844 493 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 FAPQ12884 760 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 SYPL1Q16563 259 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 LIN52Q52LA3 116 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 MRPL2Q5T653 305 aaKnown RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ATG16L1Q676U5 607 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 KLHL17Q6TDP4 642 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 TMEM108Q6UXF1 575 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 CASP12Q6UXS9 341 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF621Q6ZSS3 439 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 MSANTD1Q6ZTZ1 278 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 LHFPL2Q6ZUX7 228 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 HMGN2P46Q86SG4 172 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 PEX5LQ8IYB4 626 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF433Q8N7K0 673 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ANKFN1Q8N957 763 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 SMAP2Q8WU79 429 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF75CPQ92670 426 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ARL5BQ96KC2 179 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 HS6ST2Q96MM7 605 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 TRIM2Q9C040 744 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 OR11A1Q9GZK7 315 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 PNPOQ9NVS9 261 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 THAP1Q9NVV9 213 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ASB6Q9NWX5 421 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 NKIRAS1Q9NYS0 192 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 TAS2R16Q9NYV7 291 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 CALML5Q9NZT1 146 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 MGAT4BQ9UQ53 548 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 TRAPPC4Q9Y296 219 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 SLC9A8Q9Y2E8 581 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 MAGED1Q9Y5V3 778 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 FN1P02751 2386 aaKnown RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 TLN2Q9Y4G6 2542 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DSPPQ9NZW4 1301 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TMED7-TICAM2A0A0A6YYA0 188 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 GOLGA8QA0A0J9YX86 632 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CIB4A0PJX0 185 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 GOLGA8OA6NCC3 632 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TMEM247A6NEH6 219 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DPRXA6NFQ7 191 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CFAP73A6NFT4 308 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CCT8L1PA6NM43 557 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 SHISA9B4DS77 424 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 F8W735 103 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 GOLGA8NF8WBI6 632 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 OVOL3O00110 214 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 AP3D1O14617 1153 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ABCD4O14678 606 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF500O60304 480 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 SNNO75324 88 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 PGM3O95394 542 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ANP32DO95626 131 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 IGHV3-9P01782 118 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 IL6P05231 212 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 BCHEP06276 602 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 SOD3P08294 240 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DANCRP0C864 163 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 KITP10721 976 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CCNA2P20248 432 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 EDNRAP25101 427 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 TACR3P29371 465 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 IDUAP35475 653 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CDKN1AP38936 164 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CDKN2CP42773 168 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 SLC1A3P43003 542 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 IDH2P48735 452 aaKnown RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CRISP3P54108 245 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DSTNP60981 165 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 SLC35A1P78382 337 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DMTNQ08495 405 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 EPS8Q12929 822 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 NRF1Q16656 503 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ZSWIM7Q19AV6 140 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 CLEC12BQ2HXU8 276 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 PDCD4Q53EL6 469 aaKnown RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 C1QTNF12Q5T7M4 302 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 NXNQ6DKJ4 435 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 OR7E24Q6IFN5 339 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 PAQR6Q6TCH4 344 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 KLHL24Q6TFL4 600 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ATG4DQ86TL0 474 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 DTX2Q86UW9 622 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 ADGRG3Q86Y34 549 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 C17orf78Q8N4C9 275 aa7.1□□□□□ -1.27
TRAF3-205ENST00000558700 C1orf162Q8NEQ5 155 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 LILRB1Q8NHL6 650 aaPredicted RBP7.1□□□□□ -1.27
TRAF3-205ENST00000558700 PNPT1Q8TCS8 783 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms