RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ZFAND1Q8TCF1 268 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 RAB7BQ96AH8 199 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 C3orf30Q96M34 536 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 FAM173AQ9BQD7 235 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 TUBB1Q9H4B7 451 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SIDT1Q9NXL6 827 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 PMP2P02689 132 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 UBL4AP11441 157 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 HLA-DOBP13765 273 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 CD68P34810 354 aaPredicted RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 GPR26Q8NDV2 337 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 REEP6Q96HR9 211 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 TO15178 435 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SLC31A2O15432 143 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 B3GALT4O96024 378 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 WDR5P61964 334 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 MLLT11Q13015 90 aaPredicted RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 RBMS2Q15434 407 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 SIX1Q15475 284 aaPredicted RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 OR13C9Q8NGT0 318 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 NANOS1Q8WY41 292 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 SHISA4Q96DD7 197 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 UFSP2Q9NUQ7 469 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SLAMF8Q9P0V8 285 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 ADGRB2O60241 1585 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 PPP6CO00743 305 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 CPT2P23786 658 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SOHLH1Q5JUK2 328 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 ENTPD8Q5MY95 495 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 HIST2H3AQ71DI3 136 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 CPEB2Q7Z5Q1 589 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 SERINC5Q86VE9 423 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 PRRC1Q96M27 445 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 TWSG1Q9GZX9 223 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 ENKD1Q9H0I2 346 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 ZNF768Q9H5H4 540 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 SLC39A9Q9NUM3 307 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 GMPR2Q9P2T1 348 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 PLIN4Q96Q06 1357 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 ZNF816-ZNF321PA0A0X1KG74 233 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 M0QYG6 137 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 MRPS14O60783 128 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 KCNK2O95069 426 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 APEX1P27695 318 aaKnown RBP13.01□□□□□ -0.33
SPG11-210ENST00000558319 FCER1GP30273 86 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SLC35D2Q76EJ3 337 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 ZNF321PQ8N8H1 164 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SCCPDHQ8NBX0 429 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 SEC22CQ9BRL7 303 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 TMEM231Q9H6L2 316 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 C1GALT1Q9NS00 363 aa13.01□□□□□ -0.33
SPG11-210ENST00000558319 KCPQ6ZWJ8 1503 aa13□□□□□ -0.33
SPG11-210ENST00000558319 LRP5LA4QPB2 252 aa13□□□□□ -0.33
SPG11-210ENST00000558319 P2RX6O15547 441 aa13□□□□□ -0.33
SPG11-210ENST00000558319 AGFG1P52594 562 aaKnown RBP13□□□□□ -0.33
SPG11-210ENST00000558319 PDZK1IP1Q13113 114 aa13□□□□□ -0.33
SPG11-210ENST00000558319 ZNF750Q32MQ0 723 aa13□□□□□ -0.33
SPG11-210ENST00000558319 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 SUMF1Q8NBK3 374 aa13□□□□□ -0.33
SPG11-210ENST00000558319 ARSGQ96EG1 525 aa13□□□□□ -0.33
SPG11-210ENST00000558319 LRFN5Q96NI6 719 aa13□□□□□ -0.33
SPG11-210ENST00000558319 OR52A5Q9H2C5 316 aa13□□□□□ -0.33
SPG11-210ENST00000558319 CBY1Q9Y3M2 126 aa13□□□□□ -0.33
SPG11-210ENST00000558319 LOC102724200A0A096LPH7 203 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 PRSS38A1L453 326 aa13□□□□□ -0.33
SPG11-210ENST00000558319 B4DXG7 233 aa13□□□□□ -0.33
SPG11-210ENST00000558319 DVL1O14640 695 aa13□□□□□ -0.33
SPG11-210ENST00000558319 PTGESO14684 152 aa13□□□□□ -0.33
SPG11-210ENST00000558319 EGFP01133 1207 aa13□□□□□ -0.33
SPG11-210ENST00000558319 FUCA1P04066 466 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SHC1P29353 583 aa13□□□□□ -0.33
SPG11-210ENST00000558319 CRABP1P29762 137 aa13□□□□□ -0.33
SPG11-210ENST00000558319 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 NUDT1P36639 197 aa13□□□□□ -0.33
SPG11-210ENST00000558319 EFNA3P52797 238 aa13□□□□□ -0.33
SPG11-210ENST00000558319 DVL1P1P54792 670 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 CAMK2DQ13557 499 aa13□□□□□ -0.33
SPG11-210ENST00000558319 CDONQ4KMG0 1287 aa13□□□□□ -0.33
SPG11-210ENST00000558319 OR7E24Q6IFN5 339 aa13□□□□□ -0.33
SPG11-210ENST00000558319 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
SPG11-210ENST00000558319 RDH10Q8IZV5 341 aa13□□□□□ -0.33
SPG11-210ENST00000558319 DMBX1Q8NFW5 382 aa13□□□□□ -0.33
SPG11-210ENST00000558319 LGALS14Q8TCE9 139 aa13□□□□□ -0.33
SPG11-210ENST00000558319 YIPF5Q969M3 257 aa13□□□□□ -0.33
SPG11-210ENST00000558319 INTS12Q96CB8 462 aaKnown RBP13□□□□□ -0.33
SPG11-210ENST00000558319 BPIFA2Q96DR5 249 aa13□□□□□ -0.33
SPG11-210ENST00000558319 GPR78Q96P69 363 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SDR39U1Q9NRG7 319 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 CARD18P57730 90 aa13□□□□□ -0.33
SPG11-210ENST00000558319 TLE4Q04727 773 aa13□□□□□ -0.33
SPG11-210ENST00000558319 PHYHD1Q5SRE7 291 aa13□□□□□ -0.33
SPG11-210ENST00000558319 CPZQ66K79 652 aa13□□□□□ -0.33
SPG11-210ENST00000558319 C17orf107Q6ZR85 190 aa13□□□□□ -0.33
SPG11-210ENST00000558319 RNF141Q8WVD5 230 aa13□□□□□ -0.33
SPG11-210ENST00000558319 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
SPG11-210ENST00000558319 IGHV3-20A0A0C4DH32 117 aa13□□□□□ -0.33
SPG11-210ENST00000558319 TCRBV3S1A0A5B6 114 aa13□□□□□ -0.33
SPG11-210ENST00000558319 CCSO14618 274 aa13□□□□□ -0.33
SPG11-210ENST00000558319 SLC16A7O60669 478 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms