RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 CDHR4A6H8M9 788 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 LIPT2A6NK58 231 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 ATP6V1G2-DDX39BF2Z307 99 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 SLCO1B7G3V0H7 640 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 UBDO15205 165 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 FRS3O43559 492 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 CD5LO43866 347 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 SNNO75324 88 aaPredicted RBP13.62□□□□□ -0.23
TPM1-211ENST00000558314 PRPS1P60891 318 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 MAGOHP61326 146 aaKnown RBP13.62□□□□□ -0.23
TPM1-211ENST00000558314 H3F3AP84243 136 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 HOXC5Q00444 222 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 IL1RL1Q01638 556 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 LGALS3BPQ08380 585 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 LARS2Q15031 903 aaKnown RBP13.62□□□□□ -0.23
TPM1-211ENST00000558314 MAPK11Q15759 364 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 GSTA3Q16772 222 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 WBP2NLQ6ICG8 309 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 HMBOX1Q6NT76 420 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 NIPAL3Q6P499 406 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 ZNF525Q8N782 197 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 SLC38A5Q8WUX1 472 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 FBXO17Q96EF6 278 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 ITCHQ96J02 903 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 OR52B2Q96RD2 323 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 ADAM19Q9H013 955 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 DCTN4Q9UJW0 460 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 ZNF232Q9UNY5 417 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 MOKQ9UQ07 419 aa13.62□□□□□ -0.23
TPM1-211ENST00000558314 A8MVM7 634 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 C5orf58C9J3I9 102 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 FAAHO00519 579 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 LY6HO94772 140 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 LGI1O95970 557 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 WNT11O96014 354 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 GTF2E2P29084 291 aaKnown RBP13.61□□□□□ -0.23
TPM1-211ENST00000558314 MPGP29372 298 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 ACAA2P42765 397 aaKnown RBP13.61□□□□□ -0.23
TPM1-211ENST00000558314 POLR2JP52435 117 aaKnown RBP13.61□□□□□ -0.23
TPM1-211ENST00000558314 TUBA1BP68363 451 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 TUBA4AP68366 448 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 CARTPTQ16568 116 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 C1orf140Q5VVS0 124 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 PRAMEF8Q5VWM4 474 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 PRAMEF7Q5VXH5 474 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 AP1ARQ63HQ0 302 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 C11orf71Q6IPW1 123 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 TUBA1AQ71U36 451 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 SERPINA11Q86U17 422 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 RNF217Q8TC41 542 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 ALKBH3Q96Q83 286 aaPredicted RBP13.61□□□□□ -0.23
TPM1-211ENST00000558314 KCNS3Q9BQ31 491 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 ARMC7Q9H6L4 198 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 RPS6KB2Q9UBS0 482 aa13.61□□□□□ -0.23
TPM1-211ENST00000558314 AQP7P3A6NL99 342 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 ZNF587BE7ETH6 402 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 PDLIM1O00151 329 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 AHSA1O95433 338 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 NUDT7P0C024 238 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 TFPTP0C1Z6 253 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 CR1P17927 2039 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 SELENOPP49908 381 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 MAP2K6P52564 334 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 MVDP53602 400 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 UBE2NP61088 152 aaKnown RBP13.6□□□□□ -0.23
TPM1-211ENST00000558314 CHRNB3Q05901 458 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 SLC2A7Q6PXP3 512 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 VHLLQ6RSH7 139 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 MAVSQ7Z434 540 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 ABHD12BQ7Z5M8 362 aaPredicted RBP13.6□□□□□ -0.23
TPM1-211ENST00000558314 MIER2Q8N344 545 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 KDM8Q8N371 416 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 C17orf78Q8N4C9 275 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 ZIC4Q8N9L1 334 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 POMGNT2Q8NAT1 580 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 MAL2Q969L2 176 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 TMEM45BQ96B21 275 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 GRIP2Q9C0E4 1043 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 TMEM45AQ9NWC5 275 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 ZIM2Q9NZV7 527 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 PMF1-BGLAPU3KQ54 211 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 ABCA1O95477 2261 aa13.6□□□□□ -0.23
TPM1-211ENST00000558314 DNHD1Q96M86 4753 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 A0A096LPE4 126 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 A0A0G2JPF8 293 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 A0A1W2PPZ6 126 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 A8MV72 311 aaPredicted RBP13.59□□□□□ -0.23
TPM1-211ENST00000558314 HNRNPCL2B2RXH8 293 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 HNRNPCL3B7ZW38 293 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 TLX2O43763 284 aaPredicted RBP13.59□□□□□ -0.23
TPM1-211ENST00000558314 HNRNPCL1O60812 293 aaKnown RBP13.59□□□□□ -0.23
TPM1-211ENST00000558314 HNRNPCL4P0DMR1 293 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 BMP4P12644 408 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 CBLP22681 906 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 RPS5P46782 204 aaKnown RBP13.59□□□□□ -0.23
TPM1-211ENST00000558314 STX1BP61266 288 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 ZNF544Q6NX49 715 aa13.59□□□□□ -0.23
TPM1-211ENST00000558314 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
TPM1-211ENST00000558314 C1orf162Q8NEQ5 155 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms