RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 ACAA2P42765 397 aaKnown RBP13.91□□□□□ -0.18
SCFD1-224ENST00000557713 GZMKP49863 264 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 P2RY4P51582 365 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 NME5P56597 212 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 OR7A5Q15622 319 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 KRTAP24-1Q3LI83 254 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 COX20Q5RI15 118 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 OGFOD2Q6N063 350 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 ZNF621Q6ZSS3 439 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 TRIML2Q8N7C3 387 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 AURKBQ96GD4 344 aaPredicted RBP13.91□□□□□ -0.18
SCFD1-224ENST00000557713 PANX1Q96RD7 426 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 SSU72Q9NP77 194 aaKnown RBP13.91□□□□□ -0.18
SCFD1-224ENST00000557713 PNPOQ9NVS9 261 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 RLIMQ9NVW2 624 aa13.91□□□□□ -0.18
SCFD1-224ENST00000557713 CDHR4A6H8M9 788 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 NDUFS8O00217 210 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 GSNP06396 782 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 PGRP06401 933 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 NR2F1P10589 423 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 UQCRBP14927 111 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 CDH2P19022 906 aaPredicted RBP13.9□□□□□ -0.18
SCFD1-224ENST00000557713 NR4A2P43354 598 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 PDLIM4P50479 330 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 ANXA11P50995 505 aaKnown RBP13.9□□□□□ -0.18
SCFD1-224ENST00000557713 ZNF440Q8IYI8 595 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 KIRREL3Q8IZU9 778 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 SORCS2Q96PQ0 1159 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 PRR14Q9BWN1 585 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 OBP2BQ9NPH6 170 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 AIG1Q9NVV5 245 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 TMEM45AQ9NWC5 275 aa13.9□□□□□ -0.18
SCFD1-224ENST00000557713 SLC35F4A4IF30 521 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 TM9SF1O15321 606 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 GKN3PP0CG01 181 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 BGNP21810 368 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 PAX7P23759 505 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 IGFBP5P24593 272 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 MVDP53602 400 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 LGALS3BPQ08380 585 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 LRRC74AQ0VAA2 488 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 BNIP2Q12982 314 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 MPP2Q14168 576 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 TBRG1Q3YBR2 411 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 TMEM225Q6GV28 225 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 KLHL24Q6TFL4 600 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 CREB3L2Q70SY1 520 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-224ENST00000557713 GPAT4Q86UL3 456 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 VRK2Q86Y07 508 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 PEX5LQ8IYB4 626 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 OR1K1Q8NGR3 316 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 PNPT1Q8TCS8 783 aaKnown RBP13.89□□□□□ -0.19
SCFD1-224ENST00000557713 BCL2L2Q92843 193 aaPredicted RBP13.89□□□□□ -0.19
SCFD1-224ENST00000557713 MSI2Q96DH6 328 aaKnown RBP13.89□□□□□ -0.19
SCFD1-224ENST00000557713 FOXN4Q96NZ1 517 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 SLC38A2Q96QD8 506 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 OR52E6Q96RD3 313 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 HEATR1Q9H583 2144 aaKnown RBP13.89□□□□□ -0.19
SCFD1-224ENST00000557713 GPR45Q9Y5Y3 372 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 FKBP7Q9Y680 259 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 DSPPQ9NZW4 1301 aa13.89□□□□□ -0.19
SCFD1-224ENST00000557713 LOC390937A0A1W2PQ73 354 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 A8MVM7 634 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 SDHDO14521 159 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 VAMP5O95183 116 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 LGI1O95970 557 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 SERPINF1P36955 418 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 SELENOPP49908 381 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 SNRPD2P62316 118 aaKnown RBP13.88□□□□□ -0.19
SCFD1-224ENST00000557713 STX3Q13277 289 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 GGTLC2Q14390 218 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 WBP2NLQ6ICG8 309 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 FAM166AQ6J272 317 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 ANKRD16Q6P6B7 361 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 ZNF836Q6ZNA1 936 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 LINGO2Q7L985 606 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 SPATA19Q7Z5L4 167 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 EPHX4Q8IUS5 362 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 OR52P1PQ8NH57 321 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 PIMREGQ9BSJ6 248 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 KATNB1Q9BVA0 655 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 TAPBPLQ9BX59 468 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 CA10Q9NS85 328 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 SLC6A13Q9NSD5 602 aa13.88□□□□□ -0.19
SCFD1-224ENST00000557713 CRNNQ9UBG3 495 aaPredicted RBP13.88□□□□□ -0.19
SCFD1-224ENST00000557713 ARPC4-TTLL3A0A0A6YYG9 625 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 IGHV4-61A0A0C4DH41 118 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 LOC100289279A0A1B0GTE1 492 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 B9A039 149 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 NR5A2O00482 541 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 NPIPB7O75200 414 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 KRT33AO76009 404 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 KRT75O95678 551 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 CRYAAP02489 173 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 TFPTP0C1Z6 253 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 PRG2P13727 222 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 EFNB3Q15768 340 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 ADIPOQQ15848 244 aa13.87□□□□□ -0.19
SCFD1-224ENST00000557713 C3orf36Q3SXR2 165 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms