RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 KLHL13Q9P2N7 655 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 RASD1Q9Y272 281 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 ENPP4Q9Y6X5 453 aa12.23□□□□□ -0.45
SHMT2-234ENST00000557703 FLNBO75369 2602 aaKnown RBP12.22□□□□□ -0.45
SHMT2-234ENST00000557703 A0A1W2PRQ8 180 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 OR6C65A6NJZ3 312 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 AQP7P3A6NL99 342 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 AQP12BA6NM10 295 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 CPSF4LA6NMK7 179 aaKnown RBP12.22□□□□□ -0.45
SHMT2-234ENST00000557703 TNFSF13O75888 250 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 OPN1LWP04000 364 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 IMPDH2P12268 514 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 NCK1P16333 377 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 FPR1P21462 350 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 KIR2DL2P43627 348 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-234ENST00000557703 OR1E2P47887 323 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 RASGEF1BQ0VAM2 473 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 DGCR6Q14129 220 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 GK3PQ14409 553 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 POU4F3Q15319 338 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 ANKDD1AQ495B1 522 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 DEF8Q6ZN54 512 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 CCDC121Q6ZUS5 278 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 PIWIL3Q7Z3Z3 882 aaKnown RBP12.22□□□□□ -0.45
SHMT2-234ENST00000557703 GDF7Q7Z4P5 450 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 VTCN1Q7Z7D3 282 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 KIF18BQ86Y91 864 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 AQP12AQ8IXF9 295 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 NAXEQ8NCW5 288 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 OR4D11Q8NGI4 311 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 C7orf34Q96L11 122 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 LRGUKQ96M69 825 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
SHMT2-234ENST00000557703 WFDC6Q9BQY6 131 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 FNDC11Q9BVV2 318 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 AMBRA1Q9C0C7 1298 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 IL1RAPQ9NPH3 570 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 ELOVL5Q9NYP7 299 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 SLC7A7Q9UM01 511 aa12.22□□□□□ -0.45
SHMT2-234ENST00000557703 ANKHD1Q8IWZ3 2542 aaKnown RBP12.22□□□□□ -0.45
SHMT2-234ENST00000557703 ZC3H12DA2A288 527 aaKnown RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 FTCDNL1E5RQL4 147 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 SMAD9O15198 467 aaKnown RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 GSC2O15499 205 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 KRT36O76013 467 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 MT-ND1P03886 318 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 CCNA2P20248 432 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 BMP5P22003 454 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 SORDQ00796 357 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 TRAM2Q15035 370 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 TMEM225Q6GV28 225 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 BEND4Q6ZU67 534 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 H1FNTQ75WM6 255 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 SSX8Q7RTT4 187 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 GALNT5Q7Z7M9 940 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 RBM45Q8IUH3 476 aaKnown RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 CCDC71Q8IV32 467 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 FAM156AQ8NDB6 213 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 RNF217Q8TC41 542 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 LIPHQ8WWY8 451 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 STARD4Q96DR4 205 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 ZNF300Q96RE9 604 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 PSD2Q9BQI7 771 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 PTDSS2Q9BVG9 487 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 ASPNQ9BXN1 380 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 LRMDAQ9H2I8 198 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 FKRPQ9H9S5 495 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 NDUFAF4Q9P032 175 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 GMPR2Q9P2T1 348 aaKnown RBP12.21□□□□□ -0.45
SHMT2-234ENST00000557703 A4GNTQ9UNA3 340 aa12.21□□□□□ -0.45
SHMT2-234ENST00000557703 IGKV1D-42A0A075B6H8 117 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 A8MXE2 369 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 ACOT8O14734 319 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 LYPD3O95274 346 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 CGAP01215 116 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 SEMG1P04279 462 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 AGTR1P30556 359 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 PIN1Q13526 163 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 SLC17A1Q14916 467 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 OR7A5Q15622 319 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 FAM98BQ52LJ0 330 aaKnown RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 OTUD3Q5T2D3 398 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 PPP4R4Q6NUP7 873 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 RRM2BQ7LG56 351 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 YTHDF3Q7Z739 585 aaKnown RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 CDK20Q8IZL9 346 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 GCNT2Q8N0V5 402 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 LINC00471Q8N535 108 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 CNEP1R1Q8N9A8 125 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 PIK3C3Q8NEB9 887 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 ABHD3Q8WU67 409 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 TMEM239Q8WW34 195 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 ROBO4Q8WZ75 1007 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 RNASE6Q93091 150 aaKnown RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 TAAR8Q969N4 342 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 KTI12Q96EK9 354 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-234ENST00000557703 SPOCK3Q9BQ16 436 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 PRR14Q9BWN1 585 aa12.2□□□□□ -0.46
SHMT2-234ENST00000557703 OR10A4Q9H209 315 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms