RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 RND1Q92730 232 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 GMPPAQ96IJ6 420 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 TRIB1Q96RU8 372 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 CHID1Q9BWS9 393 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 ASPNQ9BXN1 380 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 PRRG4Q9BZD6 226 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 OR11A1Q9GZK7 315 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 MAN2C1Q9NTJ4 1040 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 TNFRSF10DQ9UBN6 386 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF229Q9UJW7 825 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 TMCC3Q9ULS5 477 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 AURKCQ9UQB9 309 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 V9GYQ6 96 aa12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 FASNP49327 2511 aaKnown RBP12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 HELZ2Q9BYK8 2649 aaKnown RBP12.64□□□□□ -0.39
SUPT16H-208ENST00000557652 LOC102725191A0A1B0GVB3 256 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 A0A1W2PNR3 127 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 ZC3H12DA2A288 527 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 GPR171O14626 319 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 HNRNPRO43390 633 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 CYTIPO60759 359 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 DEAF1O75398 565 aaPredicted RBP12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 GLI4P10075 376 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 IMPDH2P12268 514 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 CCNA2P20248 432 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 SLC9A3P48764 834 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 SLC16A1P53985 500 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 OR2B6P58173 313 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 SPIBQ01892 262 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 POU4F3Q15319 338 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 TAF11Q15544 211 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF730Q6ZMV8 503 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 MBOAT2Q6ZWT7 520 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 MCEMP1Q8IX19 187 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 SLC7A13Q8TCU3 470 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 PTDSS2Q9BVG9 487 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 SFXN3Q9BWM7 321 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 REEP1Q9H902 201 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 FANCFQ9NPI8 374 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 MRPL39Q9NYK5 338 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 COQ3Q9NZJ6 369 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 EMC3Q9P0I2 261 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF629Q9UEG4 869 aaPredicted RBP12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 RASD1Q9Y272 281 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 SPENQ96T58 3664 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 FREM1Q5H8C1 2179 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 DOPEY1Q5JWR5 2465 aa12.63□□□□□ -0.39
SUPT16H-208ENST00000557652 ALPK2Q86TB3 2170 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 IGKV3D-15A0A087WSY6 115 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 ARRDC5A6NEK1 342 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 AQP7P3A6NL99 342 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF724A8MTY0 619 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 H0YC42 278 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 J3KTA2 159 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 FKBP6O75344 327 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 CST1P01037 141 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 FPR1P21462 350 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 RRM2P31350 389 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 OPRM1P35372 400 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 YAP1P46937 504 aaKnown RBP12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 UQCRFS1P47985 274 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 TPD52P55327 224 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 PRKCDQ05655 676 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 OR7A5Q15622 319 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF74Q16587 644 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 ABLIM2Q6H8Q1 611 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 XKRXQ6PP77 449 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 H1FNTQ75WM6 255 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 NKAIN4Q8IVV8 208 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 FNDC9Q8TBE3 224 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 TAAR8Q969N4 342 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 KTI12Q96EK9 354 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 SGTBQ96EQ0 304 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 NRBF2Q96F24 287 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 ZNF845Q96IR2 970 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 SRXN1Q9BYN0 137 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 NDEL1Q9GZM8 345 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 NANSQ9NR45 359 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 DNAJB9Q9UBS3 223 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 AP4S1Q9Y587 144 aa12.62□□□□□ -0.39
SUPT16H-208ENST00000557652 UBR5O95071 2799 aaPredicted RBP12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 A0A087WUU8 490 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 SH3PXD2BA1X283 911 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 LRRTM2O43300 516 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 BGLAPP02818 100 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 HIST1H2ABP04908 130 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 CTSSP25774 331 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 RPS5P46782 204 aaKnown RBP12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 LIMS1P48059 325 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 PCYT1AP49585 367 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 ARHGDIAP52565 204 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 UGT2B15P54855 530 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 CCNIQ14094 377 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 FGD3Q5JSP0 725 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 OTUD3Q5T2D3 398 aaPredicted RBP12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 TMPRSS11FQ6ZWK6 438 aa12.61□□□□□ -0.39
SUPT16H-208ENST00000557652 HIST3H2AQ7L7L0 130 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms