RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, human

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHMT2-233	ENST00000557529	MEPCE	Q7L2J0	689 aa	Known RBP	11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	ANKRD13B	Q86YJ7	626 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	GALNT15	Q8N3T1	639 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	IL22RA1	Q8N6P7	574 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	FADS6	Q8N9I5	356 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	PROKR2	Q8NFJ6	384 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	OR2M3	Q8NG83	312 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	NKD1	Q969G9	470 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	OTULIN	Q96BN8	352 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	C12orf43	Q96C57	262 aa	Known RBP	11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	DDIT4L	Q96D03	193 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	YIPF6	Q96EC8	236 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	COG8	Q96MW5	612 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	FUNDC2	Q9BWH2	189 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	MND1	Q9BWT6	205 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	CXorf56	Q9H5V9	222 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	SH2D2A	Q9NP31	389 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	SERINC1	Q9NRX5	453 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	KNTC1	P50748	2209 aa		11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529	EP300	Q09472	2414 aa	Predicted RBP	11.31	□□□□□ -0.6
SHMT2-233	ENST00000557529		A0A087WZY1	265 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	CDRT15L2	A8MXV6	281 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	MYL12B	O14950	172 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	SNX4	O95219	450 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	PTH	P01270	115 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	CD14	P08571	375 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	FKBP2	P26885	142 aa	Known RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ATP6V1E1	P36543	226 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	AQP2	P41181	271 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	EIF1	P41567	113 aa	Known RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	FOXF1	Q12946	379 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	C1D	Q13901	141 aa	Known RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	CRMP1	Q14194	572 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	PLPPR5	Q32ZL2	321 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ALG10	Q5BKT4	473 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	EMC4	Q5J8M3	183 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ACER2	Q5QJU3	275 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	IGF2-AS	Q6U949	168 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	LSR	Q86X29	649 aa	Predicted RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	PLCZ1	Q86YW0	608 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ERI1	Q8IV48	349 aa	Known RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	WDSUB1	Q8N9V3	476 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	LRRC75A	Q8NAA5	344 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	FAM98A	Q8NCA5	519 aa	Known RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	SLC37A3	Q8NCC5	494 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	BBS1	Q8NFJ9	593 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	OR52E2	Q8NGJ4	325 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	MOSPD2	Q8NHP6	518 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ADAMTS17	Q8TE56	1095 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	NTNG2	Q96CW9	530 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	C1GALT1C1	Q96EU7	318 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	KATNB1	Q9BVA0	655 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	PTDSS2	Q9BVG9	487 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ASPN	Q9BXN1	380 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	TEKT2	Q9UIF3	430 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	ENPP5	Q9UJA9	477 aa		11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	EXOG	Q9Y2C4	368 aa	Known RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	SPIN1	Q9Y657	262 aa	Predicted RBP	11.3	□□□□□ -0.6
SHMT2-233	ENST00000557529	TMEM129	A0AVI4	362 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	ZC3H12D	A2A288	527 aa	Known RBP	11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	FAM183A	A6NL82	134 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529		B4DXG7	233 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529		H3BMQ9	156 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	SNPH	O15079	494 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	TXNDC12	O95881	172 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	CCL3	P10147	92 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	ADH6	P28332	368 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	CTXN1	P60606	82 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	ERVK-25	P63136	954 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	RPL18	Q07020	188 aa	Known RBP	11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	LGALS3BP	Q08380	585 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	MED22	Q15528	200 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	SGCB	Q16585	318 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	PRAMEF20	Q5VT98	475 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	C1QL3	Q5VWW1	255 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	GPR139	Q6DWJ6	353 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	IGFN1	Q86VF2	1251 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	P2RY8	Q86VZ1	359 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	DTX1	Q86Y01	620 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	SIRT6	Q8N6T7	355 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	NANOGP1	Q8N7R0	232 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	PSD4	Q8NDX1	1056 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	OR5J2	Q8NH18	312 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	OR4K13	Q8NH42	304 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	MFSD8	Q8NHS3	518 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	ADAMTS14	Q8WXS8	1223 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	PTP4A1	Q93096	173 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	ZBTB8A	Q96BR9	441 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	THOC3	Q96J01	351 aa	Known RBP	11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	FER1L6-AS2	Q96M78	137 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	JAM3	Q9BX67	310 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	POTEKP	Q9BYX7	375 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	NAA50	Q9GZZ1	169 aa	Known RBP	11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	TAS2R16	Q9NYV7	291 aa		11.29	□□□□□ -0.6
SHMT2-233	ENST00000557529	TNFRSF10D	Q9UBN6	386 aa		11.29	□□□□□ -0.6

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