RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TMEM45BQ96B21 275 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 OTUB1Q96FW1 271 aaPredicted RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF385AQ96PM9 386 aaKnown RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 ZNF317Q96PQ6 595 aaPredicted RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 ATOH8Q96SQ7 321 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 RHOJQ9H4E5 214 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 HINT3Q9NQE9 182 aaKnown RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 FARSBQ9NSD9 589 aaKnown RBP7.9□□□□□ -1.14
NEDD1-211ENST00000557454 GIN1Q9NXP7 522 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 NOX1Q9Y5S8 564 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 CAPN6Q9Y6Q1 641 aa7.9□□□□□ -1.14
NEDD1-211ENST00000557454 A0A096LPK6 155 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 TTC36A6NLP5 189 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 GTPBP1O00178 669 aaKnown RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 TPD52L2O43399 206 aaKnown RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ICMTO60725 284 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 IGHV4-59P01825 116 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ACP2P11117 423 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ARR3P36575 388 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 MAP3K8P41279 467 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 OR2B6P58173 313 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 BST1Q10588 318 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 MERTKQ12866 999 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 SLC17A1Q14916 467 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 PCGF3Q3KNV8 242 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 VPS26BQ4G0F5 336 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 GKAP1Q5VSY0 366 aaPredicted RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 AAED1Q7RTV5 226 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ISCA2Q86U28 154 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ZBED8Q8IZ13 594 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ZIC4Q8N9L1 334 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 IL17RDQ8NFM7 739 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 OR6Y1Q8NGX8 325 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 SLC25A43Q8WUT9 341 aaPredicted RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 CCL17Q92583 94 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 ELP4Q96EB1 424 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 C16orf58Q96GQ5 468 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 FAM71F1Q96KD3 344 aaPredicted RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 GLIPR2Q9H4G4 154 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 NOL11Q9H8H0 719 aaKnown RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 SAP30LQ9HAJ7 183 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 SERINC1Q9NRX5 453 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 TAAR3PQ9P1P4 343 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 OR5V1Q9UGF6 321 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 CHMP2BQ9UQN3 213 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 MTO1Q9Y2Z2 717 aaKnown RBP7.89□□□□□ -1.15
NEDD1-211ENST00000557454 KIAA1109Q2LD37 5005 aa7.89□□□□□ -1.15
NEDD1-211ENST00000557454 A8MXK9 166 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 OR7A17O14581 309 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 DNPH1O43598 174 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 NHLRC4P0CG21 123 aaPredicted RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 MAKP20794 623 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 LCN1P31025 176 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 MSX2P35548 267 aaPredicted RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 CAPZA2P47755 286 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 SESN3P58005 492 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 RPS23P62266 143 aaKnown RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 H3F3AP84243 136 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 DLG1Q12959 904 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 LARS2Q15031 903 aaKnown RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 DUSP5Q16690 384 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 TSTQ16762 297 aaKnown RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 PFKFB4Q16877 469 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 NSUN5P1Q3KNT7 163 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 DHRS7BQ6IAN0 325 aaPredicted RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 TTC27Q6P3X3 843 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 LRIG3Q6UXM1 1119 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 ZNF614Q8N883 585 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 OR5W2Q8NH69 310 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 TBC1D15Q8TC07 691 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 HOXB13Q92826 284 aaPredicted RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 TSPAN17Q96FV3 270 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 UBXN10Q96LJ8 280 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 TSPAN32Q96QS1 320 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 DIRC2Q96SL1 478 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 NAT9Q9BTE0 207 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 OR11A1Q9GZK7 315 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 LAT2Q9GZY6 243 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 MMP28Q9H239 520 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 ELOVL6Q9H5J4 265 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 DECR2Q9NUI1 292 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 RPUSD1Q9UJJ7 312 aaKnown RBP7.88□□□□□ -1.15
NEDD1-211ENST00000557454 FOXJ3Q9UPW0 622 aa7.88□□□□□ -1.15
NEDD1-211ENST00000557454 PLECQ15149 4684 aaKnown RBP7.87□□□□□ -1.15
NEDD1-211ENST00000557454 DOCK11Q5JSL3 2073 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 GNG14A0A1W2PPG7 69 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 H3BNH8 94 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 PCDH7O60245 1069 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 MGRN1O60291 552 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 PIAS1O75925 651 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 TSPAN9O75954 239 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 RSL1D1O76021 490 aaKnown RBP7.87□□□□□ -1.15
NEDD1-211ENST00000557454 CLPTM1O96005 669 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 PDYNP01213 254 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 FGGP02679 453 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 LYL1P12980 280 aa7.87□□□□□ -1.15
NEDD1-211ENST00000557454 ZNF35P13682 527 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms