RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 SHC1P29353 583 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 KCNJ1P48048 391 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 MTNR1BP49286 362 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 VPS41P49754 854 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ZNF41P51814 821 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 MAPK12P53778 367 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 PSMD4P55036 377 aaKnown RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 LOXL3P58215 753 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TAS2R39P59534 338 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 MRPS11P82912 194 aaKnown RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TGFBR3Q03167 851 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ILF2Q12905 390 aaKnown RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TBX2Q13207 712 aaPredicted RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CRYMQ14894 314 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 LTB4RQ15722 352 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SRSF7Q16629 238 aaKnown RBP eCLIP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 C3orf36Q3SXR2 165 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SLC9B1Q4ZJI4 515 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SPANXN3Q5MJ09 141 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CCNYL2Q5T2Q4 361 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SEL1L2Q5TEA6 688 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 NXNQ6DKJ4 435 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 LEG1Q6P5S2 330 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ANKRD16Q6P6B7 361 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 RAD9BQ6WBX8 426 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 C17orf107Q6ZR85 190 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 LRRC70Q7Z2Q7 622 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SPATA19Q7Z5L4 167 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ZC3HC1Q86WB0 502 aaKnown RBP4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CTAGE4Q8IX94 777 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 UBE2J2Q8N2K1 259 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SIGLECL1Q8N7X8 197 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CEP112Q8N8E3 955 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 L3MBTL4Q8NA19 623 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 OR4F15Q8NGB8 312 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 OR4C3Q8NH37 302 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 FBXO30Q8TB52 745 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 WDR20Q8TBZ3 569 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TBC1D15Q8TC07 691 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TM4SF18Q96CE8 201 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 MRGPRX4Q96LA9 322 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 RNF145Q96MT1 663 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TMEM185BQ9H7F4 350 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 ANKRA2Q9H9E1 313 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 BEX1Q9HBH7 125 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 POPDC3Q9HBV1 291 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 LPAR2Q9HBW0 351 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TCF7L1Q9HCS4 588 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 SLC17A5Q9NRA2 495 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 CD274Q9NZQ7 290 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 OPN4Q9UHM6 478 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 AMDHD2Q9Y303 409 aa4.03□□□□□ -1.76
SCFD1-223ENST00000557076 TENM2Q9NT68 2774 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 A0A087WV62 115 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 LOC100653049A0A140TA62 436 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 LYNX1G3V0Z9 82 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 K7EPI3 171 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 WNT9BO14905 357 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 NME6O75414 186 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 KRT34O76011 436 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 WISP3O95389 354 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 CLDN9O95484 217 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 MBD3O95983 291 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 CRYAAP02489 173 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ITGA5P08648 1049 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 IGFBP1P08833 259 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 LYNX1P0DP58 116 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ACHEP22303 614 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 MPIP34949 423 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 SFTPDP35247 375 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 SLC1A3P43003 542 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 GPR6P46095 362 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 EVX1P49640 407 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ATP6V0D1P61421 351 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 RPS7P62081 194 aaKnown RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 TRA2BP62995 288 aaKnown RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 IL1RL1Q01638 556 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 SLC18A2Q05940 514 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ZP4Q12836 540 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 BAMBIQ13145 260 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 FRG1Q14331 258 aaKnown RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 HLXQ14774 488 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 SLC9A3R2Q15599 337 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 OR4D1Q15615 310 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 TRIP13Q15645 432 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 TAF9Q16594 264 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 GFOD2Q3B7J2 385 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ELFN2Q5R3F8 820 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 OLFML2AQ68BL7 652 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 CARM1Q86X55 608 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 MISPQ8IVT2 679 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 METTL4Q8N3J2 472 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 RIBC1Q8N443 379 aaPredicted RBP4.02□□□□□ -1.77
SCFD1-223ENST00000557076 NAT8LQ8N9F0 302 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 NUP37Q8NFH4 326 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 STAG3L4Q8TBR4 150 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 ZFP90Q8TF47 636 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 MAIP1Q8WWC4 291 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 C22orf15Q8WYQ4 148 aa4.02□□□□□ -1.77
SCFD1-223ENST00000557076 RDH5Q92781 318 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms