RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 DNPH1O43598 174 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 ERLIN1O75477 346 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 FOXH1O75593 365 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 HSPA4LO95757 839 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 MPIG6BO95866 241 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 OTCP00480 354 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 OPN1MWP04001 364 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 C2P06681 752 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 OPN1MW2P0DN77 364 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 OPN1MW3P0DN78 364 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 HSD3B1P14060 373 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 HSD3B2P26439 372 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 CRYBB2P43320 205 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 CAPZA2P47755 286 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 HTR6P50406 440 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 ATP12AP54707 1039 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 ARF1P84077 181 aaKnown RBP10.6□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF763Q0D2J5 394 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 PDCD1Q15116 288 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 NKPD1Q17RQ9 610 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 DEFB112Q30KQ8 113 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 GRTP1Q5TC63 336 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 ANKRD26P1Q6NSI1 321 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 PAQR6Q6TCH4 344 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 PARP8Q8N3A8 854 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 BHLHE22Q8NFJ8 381 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-220ENST00000557037 OR9K2Q8NGE7 335 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 OR52E2Q8NGJ4 325 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 MAGEE2Q8TD90 523 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-220ENST00000557037 RAB1CQ92928 201 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 TIMD4Q96H15 378 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 GPR78Q96P69 363 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 NAA11Q9BSU3 229 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-220ENST00000557037 VPS11Q9H270 941 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 MOV10Q9HCE1 1003 aaKnown RBP10.6□□□□□ -0.71
PSEN1-220ENST00000557037 LZTFL1Q9NQ48 299 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 TMEM181Q9P2C4 612 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 CHRNA9Q9UGM1 479 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF225Q9UK10 706 aa10.6□□□□□ -0.71
PSEN1-220ENST00000557037 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 PPIAL4EA0A075B759 164 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 PPIAL4CA0A0B4J2A2 164 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 TCRBV9S1A1TA0A576 114 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 PPIAL4DF5H284 164 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
PSEN1-220ENST00000557037 TRAF3IP2O43734 574 aaPredicted RBP10.59□□□□□ -0.71
PSEN1-220ENST00000557037 UPK3AO75631 287 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 KRT6AP02538 564 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 KRT6BP04259 564 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 IFI6P09912 130 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 PPIAL4FP0DN26 164 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF12P17014 697 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 GLRXP35754 106 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 ARR3P36575 388 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 KRT6CP48668 564 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 SELENOPP49908 381 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 SLC35A1P78382 337 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 COL10A1Q03692 680 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 SKP2Q13309 424 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 GKAP1Q5VSY0 366 aaPredicted RBP10.59□□□□□ -0.71
PSEN1-220ENST00000557037 KLC3Q6P597 504 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 C9orf139Q6ZV77 190 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 USP51Q70EK9 711 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 KIF18AQ8NI77 898 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 TMEM234Q8WY98 164 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 PPP1R14AQ96A00 147 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 TRIM44Q96DX7 344 aaPredicted RBP10.59□□□□□ -0.71
PSEN1-220ENST00000557037 MS4A3Q96HJ5 214 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 CCDC106Q9BWC9 280 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 LAT2Q9GZY6 243 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 ZNF346Q9UL40 294 aaKnown RBP10.59□□□□□ -0.71
PSEN1-220ENST00000557037 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
PSEN1-220ENST00000557037 SACSQ9NZJ4 4579 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 FAM159BA6NKW6 160 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 TMEM229AB2RXF0 380 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 NPIPB9F8W1W9 429 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 H0YL77 283 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 PGRMC1O00264 195 aaKnown RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 PDPK1O15530 556 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 KLHL2O95198 593 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 UBTFL6P0CB48 400 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 IMPDH2P12268 514 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 EFNA1P20827 205 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 APOBEC1P41238 236 aaKnown RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 TEKQ02763 1124 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 SPDYAQ5MJ70 313 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 PDZK1Q5T2W1 519 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 TMEM154Q6P9G4 183 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 R3HCC1LQ7Z5L2 792 aaKnown RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 GPAT4Q86UL3 456 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 TMEM99Q8N816 258 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 IL17RDQ8NFM7 739 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 ZNF483Q8TF39 744 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 ZNF317Q96PQ6 595 aaPredicted RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 SERHL2Q9H4I8 314 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 HINT3Q9NQE9 182 aaKnown RBP10.58□□□□□ -0.72
PSEN1-220ENST00000557037 GRHL1Q9NZI5 618 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 TAAR3PQ9P1P4 343 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 TRAPPC4Q9Y296 219 aa10.58□□□□□ -0.72
PSEN1-220ENST00000557037 KCNE3Q9Y6H6 103 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms