RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 FITM2Q8N6M3 262 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 TMEM99Q8N816 258 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 CCDC197Q8NCU1 140 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 OR4D11Q8NGI4 311 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 VANGL1Q8TAA9 524 aaPredicted RBP9.49□□□□□ -0.89
LINC00239-201ENST00000556973 ADAMTS16Q8TE57 1224 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 LZICQ8WZA0 190 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 ZNF775Q96BV0 537 aaPredicted RBP9.49□□□□□ -0.89
LINC00239-201ENST00000556973 KTI12Q96EK9 354 aaPredicted RBP9.49□□□□□ -0.89
LINC00239-201ENST00000556973 EPYCQ99645 322 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 TMEM43Q9BTV4 400 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 KLHL4Q9C0H6 718 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 POLR2J2Q9GZM3 115 aaKnown RBP9.49□□□□□ -0.89
LINC00239-201ENST00000556973 POLR2J3Q9H1A7 115 aaKnown RBP9.49□□□□□ -0.89
LINC00239-201ENST00000556973 OR10A4Q9H209 315 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 ARL8BQ9NVJ2 186 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 PARPBPQ9NWS1 579 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 ADPRHL2Q9NX46 363 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 ADA2Q9NZK5 511 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 GPR52Q9Y2T5 361 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 NOSIPQ9Y314 301 aaKnown RBP9.49□□□□□ -0.89
LINC00239-201ENST00000556973 MPDZO75970 2070 aa9.49□□□□□ -0.89
LINC00239-201ENST00000556973 FAM221AA4D161 298 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 TRAPPC13A5PLN9 417 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 AQP7P3A6NL99 342 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 FTCDNL1E5RQL4 147 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 CHP2O43745 196 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 RAMP1O60894 148 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 MRPL33O75394 65 aaKnown RBP9.48□□□□□ -0.89
LINC00239-201ENST00000556973 PPP3CBP16298 524 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 GTF2E2P29084 291 aaKnown RBP9.48□□□□□ -0.89
LINC00239-201ENST00000556973 GSK3BP49841 420 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 MFSD13AQ14CX5 517 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 P2RY6Q15077 328 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 LRRC23Q53EV4 343 aaPredicted RBP9.48□□□□□ -0.89
LINC00239-201ENST00000556973 SFRP5Q5T4F7 317 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 FAM69AQ5T7M9 428 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 TTC33Q6PID6 262 aaPredicted RBP9.48□□□□□ -0.89
LINC00239-201ENST00000556973 STAC2Q6ZMT1 411 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 Q6ZT83 130 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 ZNF100Q8IYN0 542 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 GABRG1Q8N1C3 465 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 OR6S1Q8NH40 331 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 TAAR8Q969N4 342 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 SLC25A36Q96CQ1 311 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 TPD52L3Q96J77 140 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 MPP4Q96JB8 637 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 WFIKKN1Q96NZ8 548 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 KCTD14Q9BQ13 255 aaPredicted RBP9.48□□□□□ -0.89
LINC00239-201ENST00000556973 USB1Q9BQ65 265 aaKnown RBP9.48□□□□□ -0.89
LINC00239-201ENST00000556973 PTDSS2Q9BVG9 487 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 NDE1Q9NXR1 346 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 SLC7A7Q9UM01 511 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 RASD1Q9Y272 281 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 FLVCR1Q9Y5Y0 555 aa9.48□□□□□ -0.89
LINC00239-201ENST00000556973 SPTAN1Q13813 2472 aaKnown RBP9.47□□□□□ -0.89
LINC00239-201ENST00000556973 CACNA1DQ01668 2161 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 CRYBG3Q68DQ2 2970 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 IGKV1D-42A0A075B6H8 117 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 A6NNC1 897 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 FZD7O75084 574 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 GMNNO75496 209 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 CTAG2O75638 210 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 ADAP00813 363 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 PSMB1P20618 241 aaKnown RBP9.47□□□□□ -0.89
LINC00239-201ENST00000556973 OR1E2P47887 323 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 P2RY4P51582 365 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 GLYATQ6IB77 296 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 C16orf89Q6UX73 402 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 CBLL1Q75N03 491 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 GPAT4Q86UL3 456 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 CXorf67Q86X51 503 aaPredicted RBP9.47□□□□□ -0.89
LINC00239-201ENST00000556973 PGAM4Q8N0Y7 254 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 STEAP2Q8NFT2 490 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 OR9K2Q8NGE7 335 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 BCAS4Q8TDM0 211 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 APH1AQ96BI3 265 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 NSL1Q96IY1 281 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 MED18Q9BUE0 208 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 ZNF226Q9NYT6 803 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 GMPR2Q9P2T1 348 aaKnown RBP9.47□□□□□ -0.89
LINC00239-201ENST00000556973 PRSS50Q9UI38 385 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 B3GALT5Q9Y2C3 310 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 TESMINQ9Y4I5 508 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 CORINQ9Y5Q5 1042 aa9.47□□□□□ -0.89
LINC00239-201ENST00000556973 SETXQ7Z333 2677 aaKnown RBP9.47□□□□□ -0.89
LINC00239-201ENST00000556973 LOC102725191A0A1B0GVB3 256 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 B2RBV5 119 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 LYPD3O95274 346 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 SERPINA1P01009 418 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 THY1P04216 161 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 THRBP10828 461 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 HSD17B1P14061 328 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 GGT1P19440 569 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 TNFRSF1BP20333 461 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 IFNA8P32881 189 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 NTF4P34130 210 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 TAS2R41P59536 307 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 MXRA7P84157 204 aa9.46□□□□□ -0.9
LINC00239-201ENST00000556973 SLC25A3Q00325 362 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms