RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 HNRNPCL2B2RXH8 293 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 HNRNPCL3B7ZW38 293 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 FAAHO00519 579 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 POLR3GO15318 223 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 HNRNPCL1O60812 293 aaKnown RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 AKR7A3O95154 331 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 TFPTP0C1Z6 253 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 DANCRP0C864 163 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ZCCHC18P0CG32 403 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 HNRNPCL4P0DMR1 293 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 IMPDH2P12268 514 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 COX5AP20674 150 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 PTAFRP25105 342 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ACVR1BP36896 505 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 FABP6P51161 128 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 SLC16A1P53985 500 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 H3F3AP84243 136 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 BNIP2Q12982 314 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ETFDHQ16134 617 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 GABRA6Q16445 453 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 PGGHGQ32M88 737 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 GTDC1Q4AE62 458 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ZNF311Q5JNZ3 666 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 RPS26P11Q5JNZ5 115 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 TSPO2Q5TGU0 170 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 WBP2NLQ6ICG8 309 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 KLHL24Q6TFL4 600 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ZNF836Q6ZNA1 936 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ABHD12BQ7Z5M8 362 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 FBXL14Q8N1E6 418 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 CLIP4Q8N3C7 705 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 TMEM99Q8N816 258 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 SLC38A5Q8WUX1 472 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 DYDC1Q8WWB3 177 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 IGFBPL1Q8WX77 278 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 SLC25A36Q96CQ1 311 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 AURKBQ96GD4 344 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 TMEM19Q96HH6 336 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 MAELQ96JY0 434 aaKnown RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ADAD1Q96M93 576 aaKnown RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 MUS81Q96NY9 551 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 OR52B2Q96RD2 323 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 SPATA9Q9BWV2 254 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 REG4Q9BYZ8 158 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ADAM19Q9H013 955 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 RAD21L1Q9H4I0 556 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 BARX1Q9HBU1 254 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 SDR39U1Q9NRG7 319 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 SLC6A13Q9NSD5 602 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ADPRHL2Q9NX46 363 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 RPS6KB2Q9UBS0 482 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 PRDM4Q9UKN5 801 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ZNF443Q9Y2A4 671 aaPredicted RBP6.32□□□□□ -1.4
PCNX1-213ENST00000556846 IFT52Q9Y366 437 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ATP23Q9Y6H3 246 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 USH1CQ9Y6N9 552 aa6.32□□□□□ -1.4
PCNX1-213ENST00000556846 ABCA4P78363 2273 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 LIPT2A6NK58 231 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 SHISA9B4DS77 424 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 INAFM1C9JVW0 142 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 OVOL3O00110 214 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 CLIC1O00299 241 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 KLF11O14901 512 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 SSX4O60224 188 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 AHSA1O95433 338 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 WNT11O96014 354 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 PRG2P13727 222 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 RPS4Y1P22090 263 aaKnown RBP6.31□□□□□ -1.4
PCNX1-213ENST00000556846 CD40P25942 277 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 GTF2E2P29084 291 aaKnown RBP6.31□□□□□ -1.4
PCNX1-213ENST00000556846 NTF4P34130 210 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 ACAA2P42765 397 aaKnown RBP6.31□□□□□ -1.4
PCNX1-213ENST00000556846 NUDT6P53370 316 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 FOXG1P55316 489 aaPredicted RBP6.31□□□□□ -1.4
PCNX1-213ENST00000556846 PRPS1P60891 318 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 IL1RL1Q01638 556 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 PLAURQ03405 335 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 SLC17A1Q14916 467 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 RAB35Q15286 201 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 RGNQ15493 299 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 NRF1Q16656 503 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 C1orf140Q5VVS0 124 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 SLC2A7Q6PXP3 512 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 PAQR6Q6TCH4 344 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 EPGNQ6UW88 154 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 MSANTD1Q6ZTZ1 278 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 MAVSQ7Z434 540 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 MUC15Q8N387 334 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 POMGNT2Q8NAT1 580 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 MAPK1IP1LQ8NDC0 245 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 OR9K2Q8NGE7 335 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 OR9I1Q8NGQ6 314 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 LRRC8CQ8TDW0 803 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 MAL2Q969L2 176 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 TLCD1Q96CP7 247 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 DHRS9Q9BPW9 319 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 RHNO1Q9BSD3 238 aa6.31□□□□□ -1.4
PCNX1-213ENST00000556846 TRAF4Q9BUZ4 470 aaPredicted RBP6.31□□□□□ -1.4
PCNX1-213ENST00000556846 SF3B5Q9BWJ5 86 aaKnown RBP6.31□□□□□ -1.4
PCNX1-213ENST00000556846 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms