RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 EVPLLA8MZ36 301 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 FRS3O43559 492 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 NPIPB7O75200 414 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 PLAUP00749 431 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 NPPAP01160 153 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 UQCRBP14927 111 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 GPX2P18283 190 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 IGHV1-2P23083 117 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 MAP2K6P52564 334 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ITGADQ13349 1161 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 LARS2Q15031 903 aaKnown RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 P2RY6Q15077 328 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 TAB1Q15750 504 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ADRM1Q16186 407 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 RABL3Q5HYI8 236 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ZNF311Q5JNZ3 666 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 SAMD4BQ5PRF9 694 aaKnown RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 GCNT6Q5T4J0 391 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 WBP2NLQ6ICG8 309 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ZNF704Q6ZNC4 412 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 WFDC8Q8IUA0 241 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 TGIF2LYQ8IUE0 185 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 CCDC103Q8IW40 242 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 KISS1RQ969F8 398 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 DDIT4LQ96D03 193 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ZHX1-C8orf76Q96EF9 292 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 SH3GL1Q99961 368 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ECSITQ9BQ95 431 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 POTEKPQ9BYX7 375 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 MMADHCQ9H3L0 296 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 PIF1Q9H611 641 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 UBTD1Q9HAC8 227 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 FANCFQ9NPI8 374 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 DLL4Q9NR61 685 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 PRDM4Q9UKN5 801 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 EDARQ9UNE0 448 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 TRAPPC4Q9Y296 219 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 IFT52Q9Y366 437 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 NF1P21359 2839 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 MAP1AP78559 2803 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-224ENST00000556737 ZFHX3Q15911 3703 aa9.13□□□□□ -0.95
SHMT2-224ENST00000556737 TMEM247A6NEH6 219 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 FXYD1O00168 92 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 GSTA4O15217 222 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 FZD7O75084 574 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 LYZL6O75951 148 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 ETS2P15036 469 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 FPR1P21462 350 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PPIBP23284 216 aaKnown RBP9.12□□□□□ -0.95
SHMT2-224ENST00000556737 SLC6A2P23975 617 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 IL32P24001 234 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 HTR2AP28223 471 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 HOXC12P31275 282 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PRKAR1BP31321 381 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 IDUAP35475 653 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 P2RY4P51582 365 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 NR1H2P55055 460 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PCBP3P57721 371 aaKnown RBP9.12□□□□□ -0.95
SHMT2-224ENST00000556737 OR2B6P58173 313 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 ADAM8P78325 824 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 SLC35A1P78382 337 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 HOXC5Q00444 222 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 FOXD4Q12950 439 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-224ENST00000556737 BNIP2Q12982 314 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 SELPLGQ14242 412 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 SLC17A1Q14916 467 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 ACKR1Q16570 336 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 CYP51A1Q16850 503 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 ZSWIM7Q19AV6 140 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 GLIPR1L2Q4G1C9 344 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 NANOGP8Q6NSW7 305 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 DHRS4L2Q6PKH6 230 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PAQR6Q6TCH4 344 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 BHLHA15Q7RTS1 189 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-224ENST00000556737 GALNT5Q7Z7M9 940 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PTOV1Q86YD1 416 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 CADM2Q8N3J6 435 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 SLC35B4Q969S0 331 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PLPPR2Q96GM1 343 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 ANKRD27Q96NW4 1050 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PIP5K1AQ99755 562 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 KCTD14Q9BQ13 255 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-224ENST00000556737 PTDSS2Q9BVG9 487 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 HDHD5Q9BXW7 423 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 TMEM38AQ9H6F2 299 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 NANOGQ9H9S0 305 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 EMC3Q9P0I2 261 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 MALT1Q9UDY8 824 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 NOSIPQ9Y314 301 aaKnown RBP9.12□□□□□ -0.95
SHMT2-224ENST00000556737 FLVCR1Q9Y5Y0 555 aa9.12□□□□□ -0.95
SHMT2-224ENST00000556737 MTORP42345 2549 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 AQP7P3A6NL99 342 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 C5orf58C9J3I9 102 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 FTCDNL1E5RQL4 147 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 PDLIM1O00151 329 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 NME4O00746 187 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 GPR171O14626 319 aa9.11□□□□□ -0.95
SHMT2-224ENST00000556737 TPST1O60507 370 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms