RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 LHPPQ9H008 270 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 GSX1Q9H4S2 264 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NT5DC2Q9H857 520 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SLC28A3Q9HAS3 691 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 MIEF1Q9NQG6 463 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 PHPT1Q9NRX4 125 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 RLIMQ9NVW2 624 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NDRG3Q9UGV2 375 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 MOKQ9UQ07 419 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 A0A0G2JN53 185 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 LRIT2A6NDA9 550 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SHISA7A6NL88 538 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CAPN5O15484 640 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NDUFS4O43181 175 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NARSO43776 548 aaKnown RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SLC28A2O43868 658 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SOX15O60248 233 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 PRAMEF10O60809 474 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ADAP00813 363 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 APOC3P02656 99 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 JMJD7P0C870 316 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NID1P14543 1247 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF182P17025 639 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CD247P20963 164 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NTSR1P30989 418 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 BCL6P41182 706 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SLC19A1P41440 591 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 LIMS1P48059 325 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CCR5P51681 352 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 GABARAPL2P60520 117 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 RAB5BP61020 215 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SNRPD2P62316 118 aaKnown RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 TFF2Q03403 129 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 RBBP4Q09028 425 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 HTR4Q13639 388 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 PMS2P11Q13670 270 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 OR8G1Q15617 311 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SMN1Q16637 294 aaKnown RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ADPRMQ3LIE5 342 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 GCNT6Q5T4J0 391 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SAXO2Q658L1 398 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ELP2Q6IA86 826 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SNX29P2Q8IUI4 249 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 HORMAD2Q8N7B1 307 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF383Q8NA42 475 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 OR6M1Q8NGM8 313 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 OR4C6Q8NH72 309 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF420Q8TAQ5 688 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 FAM174AQ8TBP5 190 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 EDARADDQ8WWZ3 215 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NSMAFQ92636 917 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 RBPMSQ93062 196 aaKnown RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 FKBP10Q96AY3 582 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NEURL3Q96EH8 262 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 MISP3Q96FF7 219 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 FER1L6-AS2Q96M78 137 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF385AQ96PM9 386 aaKnown RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SIGLEC11Q96RL6 698 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 KCNK17Q96T54 332 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 RNF2Q99496 336 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 PITX2Q99697 317 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 KLHDC3Q9BQ90 382 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 APOOQ9BUR5 198 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 LDAHQ9H6V9 325 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CCNB1IP1Q9NPC3 277 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 NPDC1Q9NQX5 325 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 TP53TG5Q9Y2B4 290 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 OR1F1O43749 312 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 STATHP02808 62 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 HEXAP06865 529 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 KIAA1024LP59773 190 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SLC35A2P78381 396 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CDK6Q00534 326 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CSTF1Q05048 431 aaKnown RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZIC1Q15915 447 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 FGD3Q5JSP0 725 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 BROXQ5VW32 411 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 VWA1Q6PCB0 445 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 Q6ZPB1 254 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 UBQLNLQ8IYU4 475 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 FAM160A2Q8N612 972 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 SLC38A5Q8WUX1 472 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 CCDC107Q8WV48 283 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 HAS2Q92819 552 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 PPP1R14AQ96A00 147 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ZNF300Q96RE9 604 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 WFDC6Q9BQY6 131 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 OCSTAMPQ9BR26 566 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 GABARAPL3Q9BY60 117 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 TWSG1Q9GZX9 223 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 REEP1Q9H902 201 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 MYOZ1Q9NP98 299 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 OBP2BQ9NPH6 170 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 KRCC1Q9NPI7 259 aaPredicted RBP4.71□□□□□ -1.66
TMEM260-210ENST00000556422 THSD1Q9NS62 852 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 ACOXLQ9NUZ1 547 aa4.71□□□□□ -1.66
TMEM260-210ENST00000556422 MCUBQ9NWR8 336 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms