RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 OTCP00480 354 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ASS1P00966 412 aaKnown RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TNNC2P02585 160 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CISD3P0C7P0 127 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 GABRG2P18507 467 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CFL1P23528 166 aaKnown RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 GP5P40197 560 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 HTR2BP41595 481 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 SLC1A6P48664 564 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 DHPSP49366 369 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 PPP5CP53041 499 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 INCA1Q0VD86 236 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TYSND1Q2T9J0 566 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ZCWPW2Q504Y3 356 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CFAP157Q5JU67 520 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 C1orf185Q5T7R7 199 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ZNF658Q5TYW1 1059 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TPGS1Q6ZTW0 290 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CLEC20AQ6ZU45 233 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 RFPL4BQ6ZWI9 263 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TAS2R42Q7RTR8 314 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 NUFIP2Q7Z417 695 aaKnown RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ABI3BPQ7Z7G0 1075 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 SCD5Q86SK9 330 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 GLRX5Q86SX6 157 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ACOT1Q86TX2 421 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TMEM25Q86YD3 366 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ST13P4Q8IZP2 240 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 PYROXD2Q8N2H3 581 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 DEFB119Q8N690 84 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ZNF321PQ8N8H1 164 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 OR6F1Q8NGZ6 308 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 SLC2A14Q8TDB8 520 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 MAIP1Q8WWC4 291 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 LIPHQ8WWY8 451 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 FBXO32Q969P5 355 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 RAB7BQ96AH8 199 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TMIGD2Q96BF3 282 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 C14orf79Q96F83 325 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 PHYHIPLQ96FC7 376 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ANKRD36BP1Q96IX9 119 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 RPRD1AQ96P16 312 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TSSK2Q96PF2 358 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ALS2CR12Q96Q35 445 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TRIM62Q9BVG3 475 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 ELOVL4Q9GZR5 314 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 LIME1Q9H400 295 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 PARVBQ9HBI1 364 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 SPACA1Q9HBV2 294 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CSNK1G1Q9HCP0 422 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 C8orf4Q9NR00 106 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 DMAC2Q9NW81 257 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 TAS2R7Q9NYW3 318 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 UXTQ9UBK9 157 aaPredicted RBP3.57□□□□□ -1.84
PRPF39-209ENST00000556353 SLC7A8Q9UHI5 535 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CLEC4EQ9ULY5 219 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CCL27Q9Y4X3 112 aa3.57□□□□□ -1.84
PRPF39-209ENST00000556353 CELSR1Q9NYQ6 3014 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 IGHV1OR15-9A0A0B4J2B8 117 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 A0A1B0GVL5 298 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 SPAARA0A1B0GVQ0 90 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 A8MXQ7 604 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 ZNF732B4DXR9 585 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 WASH3PC4AMC7 463 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 H0Y8G0 127 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 CCDC188H7C350 402 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 GOLGA8RI6L899 631 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 BIRC5O15392 142 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 SRPX2O60687 465 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 CBR3O75828 277 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 BCAS2O75934 225 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 MBL2P11226 248 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 PRPS2P11908 318 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 MGMTP16455 207 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 CTRB1P17538 263 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 TNNI1P19237 187 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 ADORA2BP29275 332 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 CHRNA3P32297 505 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 NUP62P37198 522 aaPredicted RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 MAGEA4P43358 317 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 GDI2P50395 445 aaKnown RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 NOVA1P51513 510 aaKnown RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 SGSHP51688 502 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 NDST1P52848 882 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 PRRX1P54821 245 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 ADARP55265 1226 aaKnown RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 EIF3EP60228 445 aaKnown RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 RPS27AP62979 156 aaKnown RBP3.56□□□□□ -1.84
PRPF39-209ENST00000556353 TNNC1P63316 161 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 RCN2Q14257 317 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 LTB4RQ15722 352 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 NDUFA5Q16718 116 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 ZNF699Q32M78 642 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 SPATA46Q5T0L3 261 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 FAM46CQ5VWP2 391 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 TMEM215Q68D42 235 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 CTRB2Q6GPI1 263 aa3.56□□□□□ -1.84
PRPF39-209ENST00000556353 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms