RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 SPTY2D1-AS1A0A0U1RR47 76 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 HCRTR1O43613 425 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 CD1CP29017 333 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 CCKBRP32239 447 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 NRG3P56975 720 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 RACK1P63244 317 aaKnown RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 EIF2B5Q13144 721 aaKnown RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 STK11Q15831 433 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 TMEM201Q5SNT2 666 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 DPY19L4Q7Z388 723 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 GRAMD2AQ8IUY3 354 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 NARS2Q96I59 477 aaKnown RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 GALNT9Q9HCQ5 603 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 UBQLN4Q9NRR5 601 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 BPTFQ12830 3046 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 TACR3P29371 465 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 OR1D5P58170 312 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 ACTA2P62736 377 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 SNRPNP63162 240 aaKnown RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 ACTG2P63267 376 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 TCTE1Q5JU00 501 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 NUP54Q7Z3B4 507 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 ACOT12Q8WYK0 555 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 DAZLQ92904 295 aaKnown RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 S100A16Q96FQ6 103 aaKnown RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 GABRG3Q99928 467 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 FOXQ1Q9C009 403 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 CUTCQ9NTM9 273 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 ACOXLQ9NUZ1 547 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 CKLFQ9UBR5 152 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 ING1Q9UK53 422 aaPredicted RBP13.66□□□□□ -0.22
NEK9-209ENST00000556170 MED12Q93074 2177 aa13.66□□□□□ -0.22
NEK9-209ENST00000556170 PDCD5O14737 125 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 BRINP1O60477 761 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 FZD7O75084 574 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 SIRPAP78324 504 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 HTR4Q13639 388 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 AADACL4Q5VUY2 407 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ZNF613Q6PF04 617 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 LMF1Q96S06 567 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 HS3ST3A1Q9Y663 406 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 MEIS3P1A6NDR6 274 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 DVL2O14641 736 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 EPPINO95925 133 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 MT-ND4P03905 459 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 CD2P06729 351 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 HTR3AP46098 478 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ARRB1P49407 418 aaPredicted RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 ZNF628Q5EBL2 1059 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 TMEM69Q5SWH9 247 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ABI3BPQ7Z7G0 1075 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ZNF595Q8IYB9 648 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 TNFAIP8L1Q8WVP5 186 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 TCTN2Q96GX1 697 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 STACQ99469 402 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 GINS4Q9BRT9 223 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ALG12Q9BV10 488 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 OR10A4Q9H209 315 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 SYT4Q9H2B2 425 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 PPIEQ9UNP9 301 aaKnown RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 BAIAP2Q9UQB8 552 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ALG5Q9Y673 324 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 SCN8AQ9UQD0 1980 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 OR7A10O76100 309 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 FRKP42685 505 aaPredicted RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 POU4F2Q12837 409 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 SERTAD2Q14140 314 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 ZNF658BQ4V348 819 aaPredicted RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 PXDC1Q5TGL8 231 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 PIAS4Q8N2W9 510 aaPredicted RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 NT5CQ8TCD5 201 aa13.65□□□□□ -0.22
NEK9-209ENST00000556170 AKAP1Q92667 903 aaKnown RBP eCLIP13.65□□□□□ -0.22
NEK9-209ENST00000556170 GCDHQ92947 438 aaPredicted RBP13.65□□□□□ -0.22
NEK9-209ENST00000556170 TPPPO94811 219 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 DGAT2L6Q6ZPD8 337 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 FCRLAQ7L513 359 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 EVA1BQ9NVM1 165 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 RBFOX1Q9NWB1 397 aaKnown RBP13.64□□□□□ -0.23
NEK9-209ENST00000556170 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
NEK9-209ENST00000556170 ZNF264O43296 627 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 ZNF217O75362 1048 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 GIMD1P0DJR0 217 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 STOMP27105 288 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 PRICKLE4Q2TBC4 344 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 NOXA1Q86UR1 476 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 ZNF431Q8TF32 576 aaPredicted RBP13.64□□□□□ -0.23
NEK9-209ENST00000556170 LRRC61Q9BV99 259 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 ULBP3Q9BZM4 244 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 CCDC86Q9H6F5 360 aaKnown RBP13.64□□□□□ -0.23
NEK9-209ENST00000556170 NOX4Q9NPH5 578 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 KLF15Q9UIH9 416 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 ACAD8Q9UKU7 415 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 SIGLEC7Q9Y286 467 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 UBE2QL1A1L167 161 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 HMX3A6NHT5 357 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 KDM4EB2RXH2 506 aaPredicted RBP13.64□□□□□ -0.23
NEK9-209ENST00000556170 DUX1O43812 170 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 FZD2Q14332 565 aa13.64□□□□□ -0.23
NEK9-209ENST00000556170 GALEQ14376 348 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms