RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 MSX1P28360 303 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ATP6V1E1P36543 226 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 RPL4P36578 427 aaKnown RBP13.36□□□□□ -0.27
VPS33B-205ENST00000556096 NTRK2Q16620 822 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 GDPGP1Q6ZNW5 385 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 LINC00299Q6ZSB3 139 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 C10orf53Q8N6V4 93 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 LRRC75AQ8NAA5 344 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 OR4F15Q8NGB8 312 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ST8SIA1Q92185 356 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 KISS1RQ969F8 398 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-205ENST00000556096 NACC2Q96BF6 587 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ZHX1-C8orf76Q96EF9 292 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 KTI12Q96EK9 354 aaPredicted RBP13.36□□□□□ -0.27
VPS33B-205ENST00000556096 MOGAT1Q96PD6 335 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 RASL10BQ96S79 203 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 SPRY4Q9C004 299 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 OR51E2Q9H255 320 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 SDHAF3Q9NRP4 125 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 IGLV3-32A0A0A0MS00 114 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 TMED7-TICAM2A0A0A6YYA0 188 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 IMPA2O14732 288 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 GMFGO60234 142 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 NPIPB7O75200 414 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 BGLAPP02818 100 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 HIST1H1CP16403 213 aaKnown RBP13.36□□□□□ -0.27
VPS33B-205ENST00000556096 CPEP16870 476 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 UQCRC1P31930 480 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 DGUOKQ16854 277 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 FCRLBQ6BAA4 426 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 C5orf46Q6UWT4 87 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 USP43Q70EL4 1123 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 NDUFAF7Q7L592 441 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 SHFQ7M4L6 423 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ADGRG3Q86Y34 549 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ZNF485Q8NCK3 441 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 OR52E2Q8NGJ4 325 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 OR9Q1Q8NGQ5 310 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 OR52N1Q8NH53 320 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 STK35Q8TDR2 534 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ADAMTS14Q8WXS8 1223 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 TAAR8Q969N4 342 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 NDEL1Q9GZM8 345 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 INPP5EQ9NRR6 644 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 ERVK13-1Q9NX77 482 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 TMED7Q9Y3B3 224 aa13.36□□□□□ -0.27
VPS33B-205ENST00000556096 PTPRBP23467 1997 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 A0A1W2PNU3 283 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-205ENST00000556096 A8MVM7 634 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 SLC25A12O75746 678 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 HIST1H2ABP04908 130 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 CD14P08571 375 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 JMJD7P0C870 316 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 AQP2P41181 271 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 ACSM1Q08AH1 577 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 EIF3IQ13347 325 aaKnown RBP13.35□□□□□ -0.27
VPS33B-205ENST00000556096 TPBGQ13641 420 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 MOGQ16653 247 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 ZNF791Q3KP31 576 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-205ENST00000556096 KLHL12Q53G59 568 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 HIST3H2AQ7L7L0 130 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 LHFPL3Q86UP9 236 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 IGFN1Q86VF2 1251 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 PHC2Q8IXK0 858 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 ACBD7Q8N6N7 88 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 SIRT6Q8N6T7 355 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 OR11G2Q8NGC1 345 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 MOSPD2Q8NHP6 518 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 HIST1H2ACQ93077 130 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 SPACA9Q96E40 222 aaPredicted RBP13.35□□□□□ -0.27
VPS33B-205ENST00000556096 SECISBP2Q96T21 854 aaKnown RBP13.35□□□□□ -0.27
VPS33B-205ENST00000556096 DDOQ99489 341 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 ARHGAP9Q9BRR9 750 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 DCSTAMPQ9H295 470 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 OR51V1Q9H2C8 321 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 NDUFB11Q9NX14 153 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 SEC14L4Q9UDX3 406 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 PISDQ9UG56 409 aa13.35□□□□□ -0.27
VPS33B-205ENST00000556096 CCDC187A0A096LP49 1063 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 BLOC1S5-TXNDC5H3BN57 136 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 ETV2O00321 342 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-205ENST00000556096 SUSD5O60279 629 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 TXNDC12O95881 172 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 PTGDSP41222 190 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 SOX3P41225 446 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 SERPINB10P48595 397 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 POU4F2Q12837 409 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 ALG10Q5BKT4 473 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 OR2G6Q5TZ20 316 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 TIPARPQ7Z3E1 657 aaKnown RBP13.34□□□□□ -0.27
VPS33B-205ENST00000556096 KLHL36Q8N4N3 616 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 CYB561A3Q8NBI2 242 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 FAM98AQ8NCA5 519 aaKnown RBP13.34□□□□□ -0.27
VPS33B-205ENST00000556096 NPEPL1Q8NDH3 523 aa13.34□□□□□ -0.27
VPS33B-205ENST00000556096 KBTBD8Q8NFY9 601 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms