RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MYO18BQ8IUG5 2567 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ALPK2Q86TB3 2170 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 IGKV1D-42A0A075B6H8 117 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 MBD3L4A6NDZ8 208 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 MBD3L3A6NE82 208 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 MBD3L5A6NJ08 208 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 HSPB2A8KAH6 182 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 H0YC42 278 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TNFRSF11BO00300 401 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 KPNA4O00629 521 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 GPR171O14626 319 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ZNHIT1O43257 154 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 SEMA7AO75326 666 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 E2F6O75461 281 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 PRSS23O95084 383 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 OR6A2O95222 327 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 LYPD3O95274 346 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 WISP1O95388 367 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 CH25HO95992 272 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 LDLRP01130 860 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 THY1P04216 161 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 CRHP06850 196 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 IMPDH2P12268 514 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 IFI30P13284 250 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 PLA2G2AP14555 144 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 FPR1P21462 350 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 FASP25445 335 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TIMP3P35625 211 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ERFP50548 548 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 HMGA2P52926 109 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TPD52P55327 224 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 CTBP2P56545 445 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 EGR4Q05215 589 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 PMPCAQ10713 525 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 CCNIQ14094 377 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 HSPB2Q16082 182 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ZNF239Q16600 458 aaKnown RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 ANKDD1AQ495B1 522 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 IQCCQ4KMZ1 466 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 RIPPLY2Q5TAB7 128 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TMEM225Q6GV28 225 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 PODNL1Q6PEZ8 512 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 RPTNQ6XPR3 784 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 MBOAT2Q6ZWT7 520 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 H1FNTQ75WM6 255 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 FCRLAQ7L513 359 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TSEN54Q7Z6J9 526 aaKnown RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 ADGRE4PQ86SQ3 457 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 FJX1Q86VR8 437 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TSPYL5Q86VY4 417 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 NKAIN4Q8IVV8 208 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 SCAIQ8N9R8 606 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 OR52J3Q8NH60 311 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 MBD3L2Q8NHZ7 208 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 FNDC9Q8TBE3 224 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TMEM255BQ8WV15 326 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 RND1Q92730 232 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 KTI12Q96EK9 354 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 ZNF845Q96IR2 970 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 ALPK1Q96QP1 1244 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 TTYH2Q9BSA4 534 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 BDH2Q9BUT1 245 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 DENND2DQ9H6A0 471 aaPredicted RBP6.84□□□□□ -1.31
TDP1-214ENST00000556063 FKRPQ9H9S5 495 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 GP6Q9HCN6 339 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 NANSQ9NR45 359 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ARMC1Q9NVT9 282 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 COQ3Q9NZJ6 369 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 EMC3Q9P0I2 261 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 CLCF1Q9UBD9 225 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 DNAJB9Q9UBS3 223 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ZNF229Q9UJW7 825 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 RASD1Q9Y272 281 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 SLC5A6Q9Y289 635 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 FAM215AQ9Y5M1 114 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 ATMQ13315 3056 aa6.84□□□□□ -1.31
TDP1-214ENST00000556063 KIAA1549Q9HCM3 1950 aa6.84□□□□□ -1.32
TDP1-214ENST00000556063 CFAP47Q6ZTR5 3102 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 PRRC2CQ9Y520 2896 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 A0A087WUU8 490 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 SH3PXD2BA1X283 911 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 ENO4A6NNW6 628 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 CLOCKO15516 846 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 LRRTM2O43300 516 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 AKAP8O43823 692 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 OR10H3O60404 316 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 CYTIPO60759 359 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 OR7A10O76100 309 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 CCNB2O95067 398 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 RCBTB2O95199 551 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 TMIGD3P0DMS9 266 aaPredicted RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 GLI4P10075 376 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 SAGP10523 405 aaPredicted RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 FUT1P19526 365 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 GRPRP30550 384 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 DNAJA1P31689 397 aaKnown RBP6.83□□□□□ -1.32
TDP1-214ENST00000556063 OPRM1P35372 400 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 UQCRFS1P47985 274 aa6.83□□□□□ -1.32
TDP1-214ENST00000556063 SLC9A3P48764 834 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms