RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 RNF220Q5VTB9 566 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM225Q6GV28 225 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 CLEC2AQ6UVW9 174 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 C5orf46Q6UWT4 87 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 OLIG3Q7RTU3 272 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 NET1Q7Z628 596 aaPredicted RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 ATG4DQ86TL0 474 aaPredicted RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 ZIC4Q8N9L1 334 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 OR52N5Q8NH56 324 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 OR52P1PQ8NH57 321 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 MFSD8Q8NHS3 518 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 PPP1R36Q96LQ0 422 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TNFRSF13CQ96RJ3 184 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TAPBPLQ9BX59 468 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 LINC00470Q9BZP3 86 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 OR11A1Q9GZK7 315 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 RAD21L1Q9H4I0 556 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TPT1P8Q9HAU6 139 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 SDR39U1Q9NRG7 319 aaPredicted RBP6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC7A10Q9NS82 523 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM45AQ9NWC5 275 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 POU2F3Q9UKI9 436 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 RASD1Q9Y272 281 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 GMEB1Q9Y692 573 aa6.83□□□□□ -1.32
PTCSC3-201ENST00000556013 A8MV72 311 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 KIAA1324LA8MWY0 1029 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 VSTM5A8MXK1 200 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 RPL36A-HNRNPH2H7BZ11 118 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 NDUFS8O00217 210 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 AP3D1O14617 1153 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 SSX4O60224 188 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF500O60304 480 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 PDE5AO76074 875 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 ANP32DO95626 131 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 F12P00748 615 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 ETS2P15036 469 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 EPHA3P29320 983 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CDKN2CP42773 168 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 EFNA4P52798 201 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 WDR4P57081 412 aaKnown RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 DSTNP60981 165 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 VLDLRP98155 873 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 FADDQ13158 208 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CEACAM7Q14002 265 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 OTUD3Q5T2D3 398 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CASP12Q6UXS9 341 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CREB3L2Q70SY1 520 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CXXC5Q7LFL8 322 aaKnown RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 AAED1Q7RTV5 226 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CCDC36Q8IYA8 594 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM99Q8N816 258 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 LSMEM1Q8N8F7 131 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 IL17RDQ8NFM7 739 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 OR9K2Q8NGE7 335 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 OR52E4Q8NGH9 312 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 SLC38A5Q8WUX1 472 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 ITCHQ96J02 903 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 MDFIQ99750 246 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CACNG6Q9BXT2 260 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 MANSC1Q9H8J5 431 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 EVA1AQ9H8M9 152 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CACYBPQ9HB71 228 aaKnown RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 MYOZ1Q9NP98 299 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 CRNNQ9UBG3 495 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 GDF2Q9UK05 429 aaPredicted RBP6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 ADAM21Q9UKJ8 722 aa6.82□□□□□ -1.32
PTCSC3-201ENST00000556013 SONP18583 2426 aaKnown RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CHD3Q12873 2000 aaKnown RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 A0A096LNT2 108 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 ARPC4-TTLL3A0A0A6YYG9 625 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM120BA0PK00 339 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 ZC3H12DA2A288 527 aaKnown RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 B9A039 149 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 M0R1B8 84 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 UBDO15205 165 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 NDUFS7O75251 213 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 TGDSO95455 350 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 IGHV3-9P01782 118 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 GSNP06396 782 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CCNA2P20248 432 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CRATP43155 626 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF83P51522 516 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 P2RY4P51582 365 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 POLR2JP52435 117 aaKnown RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 NUDT6P53370 316 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 FOXG1P55316 489 aaPredicted RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 SH3BGRP55822 239 aaPredicted RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 MFSD13AQ14CX5 517 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 OR7A5Q15622 319 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 TMEM249Q2WGJ8 235 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 CHRFAM7AQ494W8 412 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 COX20Q5RI15 118 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 C1orf140Q5VVS0 124 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 KLHL24Q6TFL4 600 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 C6orf89Q6UWU4 347 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 ZNF540Q8NDQ6 660 aa6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 BHLHE22Q8NFJ8 381 aaPredicted RBP6.81□□□□□ -1.32
PTCSC3-201ENST00000556013 OR4F15Q8NGB8 312 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms