RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 ZNF559Q9BR84 538 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 HES7Q9BYE0 225 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 RTN4RQ9BZR6 473 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 TRIM2Q9C040 744 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 MAGIXQ9H6Y5 334 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 EXOSC3Q9NQT5 275 aaKnown RBP6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 DEPPQ9NTK1 212 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 TUBA8Q9NY65 449 aaPredicted RBP6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 TESQ9UGI8 421 aaKnown RBP6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 CSAG2Q9Y5P2 127 aa6.9□□□□□ -1.3
SUPT16H-204ENST00000555943 TNRC6AQ8NDV7 1962 aaKnown RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 MED13Q9UHV7 2174 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 IGLV3-32A0A0A0MS00 114 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 A0A0G2JMM0 328 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 A0A1W2PPB8 328 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 A0A1W2PRS3 328 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 TCRBV3S1A0A5B6 114 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 ANKUB1A6NFN9 424 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 KIR3DP1A8MWS1 328 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 K7EM74 188 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 hCG_2039718K7EN88 272 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 GNGT2O14610 69 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 FRS3O43559 492 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 TRIM3O75382 744 aaPredicted RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 RAP2AP10114 183 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 HK1P19367 917 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 TNFRSF1BP20333 461 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 DPP4P27487 766 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 GCKP35557 465 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 IDH2P48735 452 aaKnown RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 CRYBA2P53672 197 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 MLLT10P55197 1068 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 DSCR4P56555 118 aaPredicted RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 TAS2R41P59536 307 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 HOXC5Q00444 222 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 EPS8Q12929 822 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 CCNIQ14094 377 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 GANABQ14697 944 aaKnown RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 INPP5JQ15735 1006 aaPredicted RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 NRF1Q16656 503 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 NADK2Q4G0N4 442 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 ZFP1Q6P2D0 407 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 CBLN3Q6UW01 205 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 FAM180AQ6UWF9 173 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 Q6ZS92 163 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 LCNL1Q6ZST4 164 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 PLEKHM3Q6ZWE6 761 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 ZDHHC21Q8IVQ6 265 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 FAM86B1Q8N7N1 296 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 RBMXL3Q8N7X1 1067 aaKnown RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 WDSUB1Q8N9V3 476 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 FAM71CQ8NEG0 241 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 OR2M3Q8NG83 312 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 OR6T1Q8NGN1 323 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 NR4A3Q92570 626 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 PNPLA2Q96AD5 504 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 ZNF347Q96SE7 839 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 GPHA2Q96T91 129 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 MCHR1Q99705 422 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 FNDC11Q9BVV2 318 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 CHID1Q9BWS9 393 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 TTTY12Q9BZ98 90 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 DENND2DQ9H6A0 471 aaPredicted RBP6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 LDAHQ9H6V9 325 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 PROK2Q9HC23 129 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 PRDM4Q9UKN5 801 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 ICAM5Q9UMF0 924 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 AP4S1Q9Y587 144 aa6.89□□□□□ -1.31
SUPT16H-204ENST00000555943 NBASA2RRP1 2371 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 A0A087WZY1 265 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 PINLYPA6NC86 204 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 CPSF4LA6NMK7 179 aaKnown RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 FAM166BA8MTA8 275 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 FAM171A2A8MVW0 826 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 TFECO14948 347 aaPredicted RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 HNRNPRO43390 633 aaKnown RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 FMO6PO60774 539 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 FKBP6O75344 327 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 BCAS1O75363 584 aaPredicted RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 EPPINO95925 133 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 CST1P01037 141 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 CRYABP02511 175 aaKnown RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 PRG2P13727 222 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 ZNF24P17028 368 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 BMP7P18075 431 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 RHCEP18577 417 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 TCEA1P23193 301 aaKnown RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 CXCR1P25024 350 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 SLC7A1P30825 629 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 SRD5A2P31213 254 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 RFC3P40938 356 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 EIF1P41567 113 aaKnown RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 HTR3AP46098 478 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 YAP1P46937 504 aaKnown RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 SMIM11AP58511 58 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 ST3GAL3Q11203 375 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 FOXD4Q12950 439 aaPredicted RBP6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 SLC10A1Q14973 349 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 QPRTQ15274 297 aa6.88□□□□□ -1.31
SUPT16H-204ENST00000555943 OR1Q1Q15612 314 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms