RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 OR52E4Q8NGH9 312 aa16.23■□□□□ 0.19
NEDD1-208ENST00000555806 STK35Q8TDR2 534 aa16.23■□□□□ 0.19
NEDD1-208ENST00000555806 SF3B5Q9BWJ5 86 aaKnown RBP16.23■□□□□ 0.19
NEDD1-208ENST00000555806 CXorf56Q9H5V9 222 aa16.23■□□□□ 0.19
NEDD1-208ENST00000555806 DLL4Q9NR61 685 aa16.23■□□□□ 0.19
NEDD1-208ENST00000555806 PRORSD1PA6NEY8 169 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 DPRXA6NFQ7 191 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 FOSL1P15407 271 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 GTF2E2P29084 291 aaKnown RBP16.22■□□□□ 0.19
NEDD1-208ENST00000555806 NFYCQ13952 458 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 CYP51A1Q16850 503 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 ADAM5Q6NVV9 412 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 AAED1Q7RTV5 226 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 DPP10Q8N608 796 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 KBTBD8Q8NFY9 601 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 OR52N5Q8NH56 324 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 RNF217Q8TC41 542 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 NEUROG1Q92886 237 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 FBXW5Q969U6 566 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 TMEM45BQ96B21 275 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 SLC25A36Q96CQ1 311 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 CGREF1Q99674 301 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 TMEM120AQ9BXJ8 343 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 ROS1P08922 2347 aa16.22■□□□□ 0.19
NEDD1-208ENST00000555806 FLNAP21333 2647 aaKnown RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 ZNF469Q96JG9 3925 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 A0A1W2PR80 420 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 TPST1O60507 370 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 NPIPB7O75200 414 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 SERPINB7O75635 380 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 ITGA5P08648 1049 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 TROVE2P10155 538 aaKnown RBP eCLIP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 RPS5P46782 204 aaKnown RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 PTH2RP49190 550 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 FOXG1P55316 489 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 RGS8P57771 180 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 MTPNP58546 118 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 ADRM1Q16186 407 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 GLIPR1L2Q4G1C9 344 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 TSPO2Q5TGU0 170 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 YTHDF3Q7Z739 585 aaKnown RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 RETREG3Q86VR2 466 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 COMTD1Q86VU5 262 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 ARMC8Q8IUR7 673 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 C11orf65Q8NCR3 313 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 ANKRD27Q96NW4 1050 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 ZNF385AQ96PM9 386 aaKnown RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 RSPO3Q9BXY4 272 aaPredicted RBP16.21■□□□□ 0.19
NEDD1-208ENST00000555806 TRIM2Q9C040 744 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 SLC7A10Q9NS82 523 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 NPAP1Q9NZP6 1156 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 SELENONQ9NZV5 590 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 LAMP3Q9UQV4 416 aa16.21■□□□□ 0.19
NEDD1-208ENST00000555806 MTORP42345 2549 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 A0A1B0GWA3 101 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 VAMP5O95183 116 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 HTR2AP28223 471 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 SF3A3Q12874 501 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 SELPLGQ14242 412 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 GABRA6Q16445 453 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 ZNF672Q499Z4 452 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 ALG10BQ5I7T1 473 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 METTL21CQ5VZV1 264 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 OR7E24Q6IFN5 339 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 BHLHE22Q8NFJ8 381 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 LILRB1Q8NHL6 650 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 MFSD8Q8NHS3 518 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 TSPEARQ8WU66 669 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 DNAJA4Q8WW22 397 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 Q96MF0 132 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 PRR14Q9BWN1 585 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 GSX2Q9BZM3 304 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 SLCO5A1Q9H2Y9 848 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 GSX1Q9H4S2 264 aaPredicted RBP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 PIF1Q9H611 641 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 C12orf10Q9HB07 376 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 TESQ9UGI8 421 aaKnown RBP16.2■□□□□ 0.18
NEDD1-208ENST00000555806 RASD1Q9Y272 281 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 VPS13CQ709C8 3753 aa16.2■□□□□ 0.18
NEDD1-208ENST00000555806 ABCD4O14678 606 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 TMCC2O75069 709 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 KRT33AO76009 404 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 PNMTP11086 282 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 ZNF83P51522 516 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 P2RY4P51582 365 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 RPS4XP62701 263 aaKnown RBP16.19■□□□□ 0.18
NEDD1-208ENST00000555806 TGFBR3Q03167 851 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 EGR4Q05215 589 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 RBBP4Q09028 425 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 KLHL17Q6TDP4 642 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 C6orf89Q6UWU4 347 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 PRSS57Q6UWY2 283 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 PTOV1Q86YD1 416 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 LSMEM1Q8N8F7 131 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 ZIC4Q8N9L1 334 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 POMGNT2Q8NAT1 580 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 SMYD1Q8NB12 490 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 IGFBPL1Q8WX77 278 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 SLC38A4Q969I6 547 aa16.19■□□□□ 0.18
NEDD1-208ENST00000555806 KTI12Q96EK9 354 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms