RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ZNF407Q9C0G0 2248 aa11.19□□□□□ -0.62
SHMT2-221ENST00000555773 EIF4E1BA6NMX2 242 aaKnown RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 EFCAB9A8MZ26 197 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 H0YC42 278 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 CXCL13O43927 109 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 WDR1O75083 606 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 OR7A10O76100 309 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 SYNGR4O95473 234 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 GASTP01350 101 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 BGLAPP02818 100 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF23P17027 643 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 FPR3P25089 353 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 GTF2E2P29084 291 aaKnown RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 SLC9A3P48764 834 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 TPD52P55327 224 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 H3F3AP84243 136 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 SLC34A1Q06495 639 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 LTBQ06643 244 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 COX10Q12887 443 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 OR7A5Q15622 319 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 SOWAHCQ53LP3 525 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 PGBD2Q6P3X8 592 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 CD300LDQ6UXZ3 194 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 Q6ZPB1 254 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 H1FNTQ75WM6 255 aaPredicted RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 ADGRE4PQ86SQ3 457 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 SCAIQ8N9R8 606 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 DNAJC9Q8WXX5 260 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 SLC25A36Q96CQ1 311 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 UCN2Q96RP3 112 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 FEVQ99581 238 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 ASPNQ9BXN1 380 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 DGCR6LQ9BY27 220 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 CALHM2Q9HA72 323 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 ALKBH4Q9NXW9 302 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 TNFRSF10DQ9UBN6 386 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 MCTS1Q9ULC4 181 aaKnown RBP11.18□□□□□ -0.62
SHMT2-221ENST00000555773 B3GALT5Q9Y2C3 310 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF175Q9Y473 711 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 DNAJC13O75165 2243 aa11.18□□□□□ -0.62
SHMT2-221ENST00000555773 FIGNL2A6NMB9 653 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 KLF4O43474 513 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 PIP5K1CO60331 668 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 SLC19A2O60779 497 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 VAMP5O95183 116 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ADAP00813 363 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 TPOP07202 933 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ASAH2BP0C7U1 165 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 MAKP20794 623 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 GSTM3P21266 225 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ENPP1P22413 925 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 PRKACGP22612 351 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 GSSP48637 474 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 TSPAN31Q12999 210 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 TAF11Q15544 211 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF239Q16600 458 aaKnown RBP11.17□□□□□ -0.62
SHMT2-221ENST00000555773 GTF2IRD2BQ6EKJ0 949 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 PAQR6Q6TCH4 344 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 GTF2IRD2Q86UP8 949 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 STK32CQ86UX6 486 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 SLC43A2Q8N370 569 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 AQP11Q8NBQ7 271 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ICA1LQ8NDH6 482 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ADPRHL1Q8NDY3 354 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 OR9Q2Q8NGE9 314 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 OR5M9Q8NGP3 310 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 OR5J2Q8NH18 312 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 MOGAT1Q96PD6 335 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 TUBA1CQ9BQE3 449 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 C9orf16Q9BUW7 83 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 GABARAPL1Q9H0R8 117 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF556Q9HAH1 456 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 PNPLA3Q9NST1 481 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 MRPL39Q9NYK5 338 aaKnown RBP11.17□□□□□ -0.62
SHMT2-221ENST00000555773 OAZ3Q9UMX2 235 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 MED12Q93074 2177 aa11.17□□□□□ -0.62
SHMT2-221ENST00000555773 KMT2BQ9UMN6 2715 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 SVILO95425 2214 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 LOC102725191A0A1B0GVB3 256 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 UNC119BA6NIH7 251 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 CD8B2A6NJW9 211 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 PTP4A3O75365 173 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 SAGP10523 405 aaPredicted RBP11.16□□□□□ -0.62
SHMT2-221ENST00000555773 PTNP21246 168 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 CBLP22681 906 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 GRPRP30550 384 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 CASP6P55212 293 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 PRPS1P60891 318 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 C19orf57Q0VDD7 668 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 ZP4Q12836 540 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 PMS2P3Q13401 168 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 LAPTM4AQ15012 233 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 ZBED5Q49AG3 693 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 EMC4Q5J8M3 183 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 NSUN5P2Q63ZY6 315 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 TMEM225Q6GV28 225 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 ZNF585AQ6P3V2 769 aa11.16□□□□□ -0.62
SHMT2-221ENST00000555773 FAHD1Q6P587 224 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms