RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 KDM4DQ6B0I6 523 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 TBPL2Q6SJ96 375 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 SMARCD3Q6STE5 483 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 CD300LDQ6UXZ3 194 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF620Q6ZNG0 422 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 RASSF6Q6ZTQ3 369 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 TRILQ7L0X0 811 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 TMEM179BQ7Z7N9 219 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 P3H2Q8IVL5 708 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 HS3ST5Q8IZT8 346 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 CLDN22Q8N7P3 220 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 SETD9Q8NE22 299 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 OR13C2Q8NGS9 318 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 OR5J2Q8NH18 312 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 OR2V1Q8NHB1 315 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 POC1BQ8TC44 478 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 MIB2Q96AX9 1013 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 KTI12Q96EK9 354 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-220ENST00000555634 CRELD1Q96HD1 420 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 PLEKHA8Q96JA3 519 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 GPR137Q96N19 417 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 SLC38A2Q96QD8 506 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 UBL7Q96S82 380 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-220ENST00000555634 ZNF184Q99676 751 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-220ENST00000555634 APOL4Q9BPW4 351 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 PRRG4Q9BZD6 226 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 TSPAN10Q9H1Z9 355 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-220ENST00000555634 MEPEQ9NQ76 525 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-220ENST00000555634 C20orf141Q9NUB4 165 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 IMPAD1Q9NX62 359 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 BAIAP2Q9UQB8 552 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 CAMK2AQ9UQM7 478 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 B3GALT5Q9Y2C3 310 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 SLC6A5Q9Y345 797 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 CDH10Q9Y6N8 788 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 ASPMQ8IZT6 3477 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 DMXL2Q8TDJ6 3036 aa10.09□□□□□ -0.79
SHMT2-220ENST00000555634 USP24Q9UPU5 2620 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 A0A1W2PRG6 482 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 FIGNL2A6NMB9 653 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 K7EM74 188 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 TNFSF11O14788 317 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 RNF13O43567 381 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 NDUFB2O95178 105 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 GASTP01350 101 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CELA3AP09093 270 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 ADORA3P0DMS8 318 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 ABOP16442 354 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 ENPP1P22413 925 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 POU1F1P28069 291 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 GSSP48637 474 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 DAP3P51398 398 aaKnown RBP10.08□□□□□ -0.8
SHMT2-220ENST00000555634 RPS6KA3P51812 740 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 SMSP52788 366 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CASP6P55212 293 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CARD18P57730 90 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 B3GALT5-AS1P59052 145 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CDC42P60953 191 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CMPK2Q5EBM0 449 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 TTC23Q5W5X9 447 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF770Q6IQ21 691 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-220ENST00000555634 SLC27A4Q6P1M0 643 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 PAQR6Q6TCH4 344 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 KLHL17Q6TDP4 642 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CASP12Q6UXS9 341 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 PRICKLE2Q7Z3G6 844 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 MCEMP1Q8IX19 187 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 DHRSXQ8N5I4 330 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 ADPRHL1Q8NDY3 354 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 OR2T33Q8NG76 320 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CYGBQ8WWM9 190 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 NIPSNAP1Q9BPW8 284 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 GABARAPL3Q9BY60 117 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 SMURF2Q9HAU4 748 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 CHST11Q9NPF2 352 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 MRPL39Q9NYK5 338 aaKnown RBP10.08□□□□□ -0.8
SHMT2-220ENST00000555634 ARHGAP21Q5T5U3 1957 aa10.08□□□□□ -0.8
SHMT2-220ENST00000555634 TRAV27A0A087WT01 109 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZC3H12DA2A288 527 aaKnown RBP10.07□□□□□ -0.8
SHMT2-220ENST00000555634 LIPT2A6NK58 231 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 B4DXG7 233 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 MCIDASD6RGH6 385 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 NPIPA2E9PIF3 369 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 NPIPA3F8WFD2 350 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 BLOC1S5-TXNDC5H3BN57 136 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 M0R082 166 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 NPIPB7O75200 414 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 VAMP5O95183 116 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 SOX14O95416 240 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 IFNGP01579 166 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 NR2C1P13056 603 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 ZNF708P17019 499 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 MAKP20794 623 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 AHCYP23526 432 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 GRPRP30550 384 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 DAPP51397 102 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 AQP4P55087 323 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 RAC3P60763 192 aa10.07□□□□□ -0.8
SHMT2-220ENST00000555634 SRYQ05066 204 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms