RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 PTNP21246 168 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 CRATP43155 626 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 ZNF83P51522 516 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 CDH11P55287 796 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 MAGOHP61326 146 aaKnown RBP9.48□□□□□ -0.89
TDP1-212ENST00000555565 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
TDP1-212ENST00000555565 SPOCK1Q08629 439 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 GABRA6Q16445 453 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 GSTA3Q16772 222 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 FAM120AOSQ5T036 256 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 PAQR6Q6TCH4 344 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 TMEM108Q6UXF1 575 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 CASP12Q6UXS9 341 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 ZNF836Q6ZNA1 936 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 IL17RELQ6ZVW7 336 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 MEX3DQ86XN8 651 aaKnown RBP9.48□□□□□ -0.89
TDP1-212ENST00000555565 ZNF440Q8IYI8 595 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 OR9I1Q8NGQ6 314 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 OR52P1PQ8NH57 321 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 SLC38A5Q8WUX1 472 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 VPS33AQ96AX1 596 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 TLCD1Q96CP7 247 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 AURKBQ96GD4 344 aaPredicted RBP9.48□□□□□ -0.89
TDP1-212ENST00000555565 C1orf159Q96HA4 380 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 HS6ST2Q96MM7 605 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 MUS81Q96NY9 551 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 TPT1P8Q9HAU6 139 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 SLC7A10Q9NS82 523 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 ZIM2Q9NZV7 527 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 P2RX2Q9UBL9 471 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 CHST2Q9Y4C5 530 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 ARFGEF3Q5TH69 2177 aa9.48□□□□□ -0.89
TDP1-212ENST00000555565 LIPT2A6NK58 231 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 E7EQL1 145 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 UBDO15205 165 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 ANP32DO95626 131 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 PRG2P13727 222 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 UQCRBP14927 111 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 ZNF16P17020 682 aaPredicted RBP9.47□□□□□ -0.89
TDP1-212ENST00000555565 PTAFRP25105 342 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 CD40P25942 277 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 POLR2JP52435 117 aaKnown RBP9.47□□□□□ -0.89
TDP1-212ENST00000555565 CRISP3P54108 245 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 DSTNP60981 165 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 CEACAM7Q14002 265 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 NRF1Q16656 503 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 LIN52Q52LA3 116 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 RPS26P11Q5JNZ5 115 aaPredicted RBP9.47□□□□□ -0.89
TDP1-212ENST00000555565 OTUD3Q5T2D3 398 aaPredicted RBP9.47□□□□□ -0.89
TDP1-212ENST00000555565 TSPO2Q5TGU0 170 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 RNF220Q5VTB9 566 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 C9orf135Q5VTT2 229 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 OR7E24Q6IFN5 339 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 C11orf71Q6IPW1 123 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 MSANTD1Q6ZTZ1 278 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 CLIP4Q8N3C7 705 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 TMEM99Q8N816 258 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 ZIC4Q8N9L1 334 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 WDR31Q8NA23 367 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 RADILQ96JH8 1075 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 NAA11Q9BSU3 229 aaPredicted RBP9.47□□□□□ -0.89
TDP1-212ENST00000555565 ALG2Q9H553 416 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 TMBIM4Q9HC24 238 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 PARPBPQ9NWS1 579 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 NKIRAS1Q9NYS0 192 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 CALML5Q9NZT1 146 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 MGAT4BQ9UQ53 548 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 ZNF443Q9Y2A4 671 aaPredicted RBP9.47□□□□□ -0.89
TDP1-212ENST00000555565 SLC9A8Q9Y2E8 581 aa9.47□□□□□ -0.89
TDP1-212ENST00000555565 TGP01266 2768 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 AQP7P3A6NL99 342 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 KLF11O14901 512 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 AKR7A3O95154 331 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 GPIP06744 558 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 CXCR1P25024 350 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 TTKP33981 857 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 DSCR9P59020 149 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 SLC25A3Q00325 362 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 BNIP2Q12982 314 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 OR7A5Q15622 319 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 C6orf10Q5SRN2 563 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 BEND6Q5SZJ8 279 aaPredicted RBP9.46□□□□□ -0.9
TDP1-212ENST00000555565 AGAP6Q5VW22 663 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 WBP2NLQ6ICG8 309 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 SLC22A25Q6T423 547 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 KLHL17Q6TDP4 642 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 B3GLCTQ6Y288 498 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 CADM2Q8N3J6 435 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 ZNF525Q8N782 197 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 OR9K2Q8NGE7 335 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 GTF2H4Q92759 462 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 TMEM45BQ96B21 275 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 TMEM19Q96HH6 336 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 ITCHQ96J02 903 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 ZNF385AQ96PM9 386 aaKnown RBP9.46□□□□□ -0.9
TDP1-212ENST00000555565 C1QTNF6Q9BXI9 259 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 PAIP1Q9H074 479 aaKnown RBP9.46□□□□□ -0.9
TDP1-212ENST00000555565 RMND5AQ9H871 391 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 SLC17A5Q9NRA2 495 aa9.46□□□□□ -0.9
TDP1-212ENST00000555565 FAIMQ9NVQ4 179 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms