RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PTNP21246 168 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 FUT4P22083 530 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 CTBP2P56545 445 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 NUP107P57740 925 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 RNPS1Q15287 305 aaKnown RBP12.78□□□□□ -0.36
CHD8-208ENST00000555301 ZNF74Q16587 644 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 PODNL1Q6PEZ8 512 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 FCRLAQ7L513 359 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 MAMDC2Q7Z304 686 aaPredicted RBP12.78□□□□□ -0.36
CHD8-208ENST00000555301 FJX1Q86VR8 437 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 NRMQ8IXM6 262 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 LINC00471Q8N535 108 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 SGTBQ96EQ0 304 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 ZFP3Q96NJ6 502 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 DMRTA2Q96SC8 542 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 ASPNQ9BXN1 380 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 FKRPQ9H9S5 495 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 RNF122Q9H9V4 155 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 NANSQ9NR45 359 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 C6orf203Q9P0P8 240 aaPredicted RBP12.78□□□□□ -0.36
CHD8-208ENST00000555301 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 SAMHD1Q9Y3Z3 626 aaKnown RBP12.78□□□□□ -0.36
CHD8-208ENST00000555301 LYVE1Q9Y5Y7 322 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 HEATR5AQ86XA9 2040 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 SHANK1Q9Y566 2161 aa12.77□□□□□ -0.36
CHD8-208ENST00000555301 TRBV4-1A0A0J9YWV2 114 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 SH3PXD2BA1X283 911 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 ANKRD65E5RJM6 399 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 SMAD9O15198 467 aaKnown RBP12.77□□□□□ -0.37
CHD8-208ENST00000555301 CLOCKO15516 846 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 LRRTM2O43300 516 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.37
CHD8-208ENST00000555301 VAMP5O95183 116 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 RCBTB2O95199 551 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 TGM6O95932 706 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 CH25HO95992 272 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 BGLAPP02818 100 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 GLI4P10075 376 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 IFI30P13284 250 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 FASP25445 335 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 IFNGR2P38484 337 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 LIMS1P48059 325 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 PER3P56645 1201 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 H3F3AP84243 136 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 PRKCDQ05655 676 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 LTBQ06643 244 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 PMPCAQ10713 525 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 OTUD3Q5T2D3 398 aaPredicted RBP12.77□□□□□ -0.37
CHD8-208ENST00000555301 RIPPLY2Q5TAB7 128 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 SEM1Q6ZVN7 128 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 MCEMP1Q8IX19 187 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 RPRMLQ8N4K4 120 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 SCAIQ8N9R8 606 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 C9orf106Q8NAJ2 232 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 OR4K5Q8NGD3 323 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 PIGXQ8TBF5 258 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 RNF128Q8TEB7 428 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 ROBO4Q8WZ75 1007 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 RND1Q92730 232 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 BPIFA2Q96DR5 249 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 FUZQ9BT04 418 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 GLRX2Q9NS18 164 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 KLHL9Q9P2J3 617 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 ZNF229Q9UJW7 825 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 SLC5A6Q9Y289 635 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 TMEM5Q9Y2B1 443 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 B3GALT5Q9Y2C3 310 aa12.77□□□□□ -0.37
CHD8-208ENST00000555301 IGHV3-15A0A0B4J1V0 119 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 AQP7P3A6NL99 342 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 HSPB2A8KAH6 182 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 KDM4EB2RXH2 506 aaPredicted RBP12.76□□□□□ -0.37
CHD8-208ENST00000555301 CYTIPO60759 359 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 ENTPD5O75356 428 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 TIPRLO75663 272 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 OR7A10O76100 309 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 AQP8O94778 261 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 AKR7A3O95154 331 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 PLGP00747 810 aaPredicted RBP12.76□□□□□ -0.37
CHD8-208ENST00000555301 LDLRP01130 860 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 HIST1H2ABP04908 130 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 CRHP06850 196 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 GRPRP30550 384 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 CEACAM8P31997 349 aaPredicted RBP12.76□□□□□ -0.37
CHD8-208ENST00000555301 PDK3Q15120 406 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 HSPB2Q16082 182 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 EXOC3L2Q2M3D2 409 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 EEF1A1P5Q5VTE0 462 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 TMEM225Q6GV28 225 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 ABLIM2Q6H8Q1 611 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 TBPL2Q6SJ96 375 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 H1FNTQ75WM6 255 aaPredicted RBP12.76□□□□□ -0.37
CHD8-208ENST00000555301 ZNF771Q7L3S4 317 aaPredicted RBP12.76□□□□□ -0.37
CHD8-208ENST00000555301 HIST3H2AQ7L7L0 130 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 LSRQ86X29 649 aaPredicted RBP12.76□□□□□ -0.37
CHD8-208ENST00000555301 MARVELD2Q8N4S9 558 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 TMEM99Q8N816 258 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 ADPRHL1Q8NDY3 354 aa12.76□□□□□ -0.37
CHD8-208ENST00000555301 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms