RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 ZIC4Q8N9L1 334 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 STK35Q8TDR2 534 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 ADAMTS16Q8TE57 1224 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 DNAJA4Q8WW22 397 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-214ENST00000554928 SLC25A36Q96CQ1 311 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 TPD52L3Q96J77 140 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 KCTD14Q9BQ13 255 aaPredicted RBP10.96□□□□□ -0.65
SYNE2-214ENST00000554928 PRSS27Q9BQR3 290 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 C12orf10Q9HB07 376 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 SPAG4Q9NPE6 437 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 GLRX2Q9NS18 164 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 ADA2Q9NZK5 511 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 KLHL9Q9P2J3 617 aa10.96□□□□□ -0.65
SYNE2-214ENST00000554928 CACNA1DQ01668 2161 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 AQP7P3A6NL99 342 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF724A8MTY0 619 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 J3KTA2 159 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 GSTA4O15217 222 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 DNPH1O43598 174 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 FMO6PO60774 539 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 AHSA1O95433 338 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 SERPINA1P01009 418 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 IGHV3-9P01782 118 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 BGLAPP02818 100 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 GPIP06744 558 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 PNMTP11086 282 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 POU2F1P14859 743 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 GGT1P19440 569 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 TCN1P20061 433 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 FKBP2P26885 142 aaKnown RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 UGT2B10P36537 528 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 YAP1P46937 504 aaKnown RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 MAP2K6P52564 334 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 SLC16A1P53985 500 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 FOXG1P55316 489 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 TLE4Q04727 773 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 EEF1A1P5Q5VTE0 462 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 GTF2IRD2BQ6EKJ0 949 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 PAQR6Q6TCH4 344 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 LINC00114Q6XXX2 140 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 STAC2Q6ZMT1 411 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 RINLQ6ZS11 566 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 GDF7Q7Z4P5 450 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 TSEN54Q7Z6J9 526 aaKnown RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 GTF2IRD2Q86UP8 949 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 NKAIN4Q8IVV8 208 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 WDFY1Q8IWB7 410 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 PGAM4Q8N0Y7 254 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 PROX1Q92786 737 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 ZHX1-C8orf76Q96EF9 292 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 SLC47A1Q96FL8 570 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 WFIKKN1Q96NZ8 548 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 MOGAT1Q96PD6 335 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 CDRT15Q96T59 188 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 AMBRA1Q9C0C7 1298 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 KLHL4Q9C0H6 718 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 PCDHAC1Q9H158 963 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 CD300AQ9UGN4 299 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 FOXD3Q9UJU5 478 aaPredicted RBP10.95□□□□□ -0.66
SYNE2-214ENST00000554928 SLC7A7Q9UM01 511 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 AP3M1Q9Y2T2 418 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 FLVCR1Q9Y5Y0 555 aa10.95□□□□□ -0.66
SYNE2-214ENST00000554928 TRAV36DV7A0A075B6V5 113 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 TUBAL3A6NHL2 446 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 B2RBV5 119 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 M0R082 166 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 KPNA4O00629 521 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-214ENST00000554928 NDUFAB1O14561 156 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 SIAH2O43255 324 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 CHP2O43745 196 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 FZD7O75084 574 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF682O95780 498 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 HPRP00739 348 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 GRPRP30550 384 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 OR3A2P47893 321 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 SELENOWP63302 87 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 SORDQ00796 357 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 LGALS3BPQ08380 585 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 PIN1Q13526 163 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-214ENST00000554928 SLC17A1Q14916 467 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 PDK3Q15120 406 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF613Q6PF04 617 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 CBLL1Q75N03 491 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 GALNT5Q7Z7M9 940 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 CXorf67Q86X51 503 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-214ENST00000554928 DEFB107AQ8IZN7 70 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 GABRG1Q8N1C3 465 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 OR9K2Q8NGE7 335 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 MFSD8Q8NHS3 518 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF417Q8TAU3 575 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 PIGXQ8TBF5 258 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 BCAS4Q8TDM0 211 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 SLC41A3Q96GZ6 507 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 NSL1Q96IY1 281 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 HSH2DQ96JZ2 352 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 ZNF587Q96SQ5 575 aaPredicted RBP10.94□□□□□ -0.66
SYNE2-214ENST00000554928 TAPBPLQ9BX59 468 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 GP6Q9HCN6 339 aa10.94□□□□□ -0.66
SYNE2-214ENST00000554928 B3GAT1Q9P2W7 334 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms