RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 ANKRD17O75179 2603 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CLCA1A8K7I4 914 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 HSPB2A8KAH6 182 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 KRTAP29-1A8MX34 341 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TMEM114B3SHH9 223 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 H0Y3Z8 333 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 H3BNX3 289 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TM9SF1O15321 606 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 BIRC5O15392 142 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CTIFO43310 598 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 EMC8O43402 210 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 PEX11AO75192 247 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 KCNK2O95069 426 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 C6orf47O95873 294 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 MBPP02686 304 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 NGFRP08138 427 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 LAMP1P11279 417 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 G6PDP11413 515 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 BGNP21810 368 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CHMP24386 653 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DPP4P27487 766 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 RPL3P39023 403 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 PRIM2P49643 509 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 STARP49675 285 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 ASCL1P50553 236 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DIO3P55073 304 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DSCR4P56555 118 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CLDN15P56746 228 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CLDN8P56748 225 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 ABCE1P61221 599 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TLE4Q04727 773 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 EMX2Q04743 252 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 STX5Q13190 355 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 GANABQ14697 944 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 LASP1Q14847 261 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CD226Q15762 336 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CHI3L2Q15782 390 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 HSPB2Q16082 182 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 PDCD2Q16342 344 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DECR1Q16698 335 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TMEM44Q2T9K0 475 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CEP85LQ5SZL2 805 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 IL23RQ5VWK5 629 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 ABLIM2Q6H8Q1 611 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CDC73Q6P1J9 531 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 AAGABQ6PD74 315 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 PLXDC2Q6UX71 529 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 LRIG3Q6UXM1 1119 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 R3HCC1LQ7Z5L2 792 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CAMKMTQ7Z624 323 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 MARCH3Q86UD3 253 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 IFNEQ86WN2 208 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 NUDCD3Q8IVD9 361 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 RIMKLAQ8IXN7 391 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 KRTCAP2Q8N6L1 136 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CDRT4Q8N9R6 151 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 FNDC5Q8NAU1 212 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OR7A2PQ8NGA2 310 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OR4K17Q8NGC6 315 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OR5M1Q8NGP8 315 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OR10Q1Q8NGQ4 319 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OR14L1PQ8NHC6 308 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CEP70Q8NHQ1 597 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 PSMA8Q8TAA3 256 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 ZPLD1Q8TCW7 415 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OR5P2Q8WZ92 322 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 RNASE6Q93091 150 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 MTERF3Q96E29 417 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 FAM120BQ96EK7 910 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DTNBP1Q96EV8 351 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 OTUB1Q96FW1 271 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TRMT61AQ96FX7 289 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 C16orf58Q96GQ5 468 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 STACQ99469 402 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 KLHDC3Q9BQ90 382 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TM2D2Q9BX73 214 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 C20orf27Q9GZN8 174 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DSN1Q9H410 356 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 CALHM2Q9HA72 323 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 C3orf14Q9HBI5 128 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 MCCC2Q9HCC0 563 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 ZCCHC3Q9NUD5 404 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TAS2R10Q9NYW0 307 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 KCNN3Q9UGI6 736 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 DKKL1Q9UK85 242 aa3.72□□□□□ -1.81
VTI1B-203ENST00000554636 RPH3AQ9Y2J0 694 aaPredicted RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 TEP1Q99973 2627 aaKnown RBP3.72□□□□□ -1.81
VTI1B-203ENST00000554636 MED13LQ71F56 2210 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NPIPA5A0A0B4J1W7 369 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 A0A1W2PQD3 144 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 A0A1W2PRB8 838 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 OR2M5A3KFT3 312 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ENO4A6NNW6 628 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NPIPA7E9PJI5 369 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 NPIPB9F8W1W9 429 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 H0YC42 278 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SYT5O00445 386 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 SDHDO14521 159 aa3.71□□□□□ -1.82
VTI1B-203ENST00000554636 ANKRD28O15084 1053 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms