RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 NEURL1O76050 574 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 LGI1O95970 557 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 DBIP07108 87 aaKnown RBP5.71□□□□□ -1.5
SCFD1-212ENST00000554486 CCL3P10147 92 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 TNFRSF1BP20333 461 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 PRKAR1BP31321 381 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 EVI2BP34910 448 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 TMED10P49755 219 aaKnown RBP5.71□□□□□ -1.5
SCFD1-212ENST00000554486 GAS1P54826 345 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 ACTR3P61158 418 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 FLOT2Q14254 428 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 FGFBP1Q14512 234 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 CD226Q15762 336 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 SMN1Q16637 294 aaKnown RBP5.71□□□□□ -1.5
SCFD1-212ENST00000554486 NRF1Q16656 503 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 NDUFAF6Q330K2 333 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 GLIPR1L2Q4G1C9 344 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 LIN52Q52LA3 116 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MTX3Q5HYI7 312 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF311Q5JNZ3 666 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MRPL2Q5T653 305 aaKnown RBP5.71□□□□□ -1.5
SCFD1-212ENST00000554486 IRAK1BP1Q5VVH5 260 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM81Q6P7N7 255 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF836Q6ZNA1 936 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 RTL4Q6ZR62 310 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MDGA2Q7Z553 956 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 VTCN1Q7Z7D3 282 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MARCH3Q86UD3 253 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 ARMC8Q8IUR7 673 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 AQP12AQ8IXF9 295 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 DND1Q8IYX4 353 aaKnown RBP5.71□□□□□ -1.5
SCFD1-212ENST00000554486 EID3Q8N140 333 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 CYP4Z2PQ8N1L4 340 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 TMEM156Q8N614 296 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 GATSQ8NAP1 163 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 SMYD1Q8NB12 490 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MDS2Q8NDY4 140 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 OR4D11Q8NGI4 311 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 PAQR8Q8TEZ7 354 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 CNOT9Q92600 299 aaKnown RBP5.71□□□□□ -1.5
SCFD1-212ENST00000554486 HAS2Q92819 552 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 NSMCE2Q96MF7 247 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 RNF145Q96MT1 663 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 SIGLEC12Q96PQ1 595 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 KLHDC3Q9BQ90 382 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 WFDC6Q9BQY6 131 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 PINK1Q9BXM7 581 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 TRIM15Q9C019 465 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 HOXD1Q9GZZ0 328 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 ABI3Q9P2A4 366 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 SEC14L3Q9UDX4 400 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 ITGB1BP2Q9UKP3 347 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 IFT52Q9Y366 437 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 DTNAQ9Y4J8 743 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 V9GYQ6 96 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MED12Q93074 2177 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 NCKAP5O14513 1909 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 MPDZO75970 2070 aa5.71□□□□□ -1.5
SCFD1-212ENST00000554486 OR5H15A6NDH6 313 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CLCA1A8K7I4 914 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 K7EM74 188 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 M0R3H8 397 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 RAB27BO00194 218 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SYT5O00445 386 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 TP53I11O14683 189 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SCO2O43819 266 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF682O95780 498 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 IFNA14P01570 189 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SEMG1P04279 462 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 FESP07332 822 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 IL7RP16871 459 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ACVR2AP27037 513 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CASP3P42574 277 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CYB561P49447 251 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF136P52737 540 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SELENOWP63302 87 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 KCNJ10P78508 379 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 OC90Q02509 493 aaPredicted RBP5.7□□□□□ -1.5
SCFD1-212ENST00000554486 LARS2Q15031 903 aaKnown RBP5.7□□□□□ -1.5
SCFD1-212ENST00000554486 OR1C1Q15619 314 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 NPTX1Q15818 432 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 LINC00303Q3SY05 128 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 IQCCQ4KMZ1 466 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 PRAMEF20Q5VT98 475 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SLC22A10Q63ZE4 541 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SPINK14Q6IE38 97 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 TSEN54Q7Z6J9 526 aaKnown RBP5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SPATA24Q86W54 205 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 GRAMD2AQ8IUY3 354 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 LACC1Q8IV20 430 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF614Q8N883 585 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF527Q8NB42 609 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 BEND2Q8NDZ0 799 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CATSPER1Q8NEC5 780 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 FAM71CQ8NEG0 241 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SLC26A7Q8TE54 656 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 CANT1Q8WVQ1 401 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 OIT3Q8WWZ8 545 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 SLCO4A1Q96BD0 722 aa5.7□□□□□ -1.5
SCFD1-212ENST00000554486 ZNF524Q96C55 264 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms