RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 DDAH2O95865 285 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 NR0B1P51843 470 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 C1DQ13901 141 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 DSG2Q14126 1118 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 SERTAD2Q14140 314 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TMPRSS11AQ6ZMR5 421 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 OR10Z1Q8NGY1 313 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 SAP25Q8TEE9 199 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 NR4A3Q92570 626 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 HS6ST2Q96MM7 605 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 DCLRE1CQ96SD1 692 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 GTPBP2Q9BX10 602 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 SLC22A11Q9NSA0 550 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 RPS6KB2Q9UBS0 482 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 LSM2Q9Y333 95 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 A0A1B0GX78 115 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TOR1AO14656 332 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 KHNYNO15037 678 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 PRODHO43272 600 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 REM1O75628 298 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 PPP1R3DO95685 299 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TSPAN19P0C672 248 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 PIPP12273 146 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TBXA2RP21731 343 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 GAS1P54826 345 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 PER3P56645 1201 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 PSPHP78330 225 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 FGFBP1Q14512 234 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 POU4F3Q15319 338 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF791Q3KP31 576 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 BMP8AQ7Z5Y6 402 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 OR8H3Q8N146 312 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 ADAMTS18Q8TE60 1221 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 GIMAP1Q8WWP7 306 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 CRELD1Q96HD1 420 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 G6PC3Q9BUM1 346 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TAPBPLQ9BX59 468 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 TTTY10Q9BZA0 68 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 OR51V1Q9H2C8 321 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 MIXL1Q9H2W2 232 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 U3KQ87 197 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 KIF26BQ2KJY2 2108 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 NPIPB9F8W1W9 429 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 SEC14L5O43304 696 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 WISP1O95388 367 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 RAB36O95755 333 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 MRPL3P09001 348 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 NOS3P29474 1203 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 HNRNPA0Q13151 305 aaKnown RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 NCF4Q15080 339 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 OAFQ86UD1 273 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 C9orf40Q8IXQ3 194 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 MAML2Q8IZL2 1156 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 SYT14Q8NB59 555 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 ZBTB44Q8NCP5 570 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 OR51G2Q8NGK0 314 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 FBXW5Q969U6 566 aa10.7□□□□□ -0.7
SHMT2-212ENST00000554467 AKIRIN1Q9H9L7 192 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-212ENST00000554467 MED12Q93074 2177 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 ASPMQ8IZT6 3477 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 A0A1B0GTQ1 180 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 BMP7P18075 431 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 ZXDAP98168 799 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 RIN1Q13671 783 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 WDR74Q6RFH5 385 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-212ENST00000554467 PRSS42Q7Z5A4 293 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 CDK20Q8IZL9 346 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 NANOGP1Q8N7R0 232 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 FAM181AQ8N9Y4 354 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 OR52L1Q8NGH7 329 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 OR51L1Q8NGJ5 315 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 C9orf43Q8TAL5 461 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF721Q8TF20 911 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 EDAQ92838 391 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 DIRAS2Q96HU8 199 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 MND1Q9BWT6 205 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 HEXA-AS1Q9H8Q6 139 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 MCUBQ9NWR8 336 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 SSR3Q9UNL2 185 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 IGKV3D-11A0A0A0MRZ8 115 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 C2orf92A0A1B0GVN3 265 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 IMPA2O14732 288 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 CHP2O43745 196 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 ICOSLGO75144 302 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 UTS2O95399 124 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 MYL12AP19105 171 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 RPS7P62081 194 aaKnown RBP10.69□□□□□ -0.7
SHMT2-212ENST00000554467 SCN1BQ07699 218 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 GALEQ14376 348 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 NR0B2Q15466 257 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF141Q15928 474 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 AANATQ16613 207 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 PHF19Q5T6S3 580 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 MEDAGQ5VYS4 303 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 PWWP2BQ6NUJ5 590 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 CXXC5Q7LFL8 322 aaKnown RBP10.69□□□□□ -0.7
SHMT2-212ENST00000554467 SIRT6Q8N6T7 355 aa10.69□□□□□ -0.7
SHMT2-212ENST00000554467 ZNF680Q8NEM1 530 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms