RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 LMNTD1Q8N9Z9 388 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 KYQ8NBH2 561 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ADPRHL1Q8NDY3 354 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FAM83FQ8NEG4 500 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 OR11L1Q8NGX0 322 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FNDC8Q8TC99 324 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 HM13Q8TCT9 377 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LHX4Q969G2 390 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MOCOSQ96EN8 888 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 SGTBQ96EQ0 304 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CPNE2Q96FN4 548 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 AKR1E2Q96JD6 320 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 RPL10LQ96L21 214 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CCDC140Q96MF4 163 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 WDR92Q96MX6 357 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CPXM1Q96SM3 734 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 IL12RB2Q99665 862 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MAP3K3Q99759 626 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PRRT1Q99946 306 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MYOCQ99972 504 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CENPKQ9BS16 269 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TIMM29Q9BSF4 260 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 APOOQ9BUR5 198 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ST6GALNAC5Q9BVH7 336 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FSD1LQ9BXM9 530 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 TEX101Q9BY14 249 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DGCR6LQ9BY27 220 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GANQ9H2C0 597 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CDIP1Q9H305 208 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 WDR76Q9H967 626 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 ACTR5Q9H9F9 607 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GPN2Q9H9Y4 310 aaPredicted RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MRPS18AQ9NVS2 196 aaKnown RBP2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GPATCH2Q9NW75 528 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 DDIT4Q9NX09 232 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 GPR83Q9NYM4 423 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 CD274Q9NZQ7 290 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 VAPAQ9P0L0 249 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 LHX3Q9UBR4 397 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 NDRG3Q9UGV2 375 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PHF11Q9UIL8 331 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 MGAT4AQ9UM21 535 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 FKBP7Q9Y680 259 aa2.48□□□□□ -2.01
PRPF39-206ENST00000554429 PRAMEF33A0A0G2JMD5 474 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SH3PXD2BA1X283 911 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FITM1A5D6W6 292 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 C5orf60A6NFR6 353 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 IGLON5A6NGN9 336 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PRR19A6NJB7 356 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RFPL4AA6NLU0 287 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RFPL4AL1F8VTS6 287 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 M0QZ24 198 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TSPAN2O60636 221 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SNAP91O60641 907 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PRAMEF10O60809 474 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 POP7O75817 140 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SC5DO75845 299 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CEACAM4O75871 244 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CNIH1O95406 144 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ACTL6AO96019 429 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CHRNGP07510 517 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 MELTFP08582 738 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FGF5P12034 268 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PRF1P14222 555 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 COX7A2P14406 83 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CYP11B1P15538 503 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 NQO1P15559 274 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CD1EP15812 388 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 COMTP21964 271 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 S100PP25815 95 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 APEX1P27695 318 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CD68P34810 354 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CPOXP36551 454 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 ACVR1BP36896 505 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TALDO1P37837 337 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PGGT1BP53609 377 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 AP2S1P53680 142 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CLDN2P57739 230 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 HSD11B2P80365 405 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 VLDLRP98155 873 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PITPNAQ00169 270 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TLE1Q04724 770 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 RAD51Q06609 339 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 DNASE1L3Q13609 305 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 KRT33BQ14525 404 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GANABQ14697 944 aaKnown RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GSTA3Q16772 222 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GUK1Q16774 197 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 VWC2Q2TAL6 325 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 NRN1LQ496H8 165 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 PTPN20Q4JDL3 420 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 AKIRIN2Q53H80 203 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TIGD3Q6B0B8 471 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 FAHD2BQ6P2I3 314 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 GLDNQ6ZMI3 551 aaPredicted RBP2.47□□□□□ -2.01
PRPF39-206ENST00000554429 CFAP77Q6ZQR2 320 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 SLC16A9Q7RTY1 509 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 TMEM17Q86X19 198 aa2.47□□□□□ -2.01
PRPF39-206ENST00000554429 XYLT1Q86Y38 959 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms